Saha N, et al. (2024) Cdc73 is a major regulator of apoptosis-inducing factor 1 expression in Saccharomyces cerevisiae via H3K36 methylation. FEBS Lett.
PMID: 38467538
Yoshii SR and Barral Y (2024) Correction: Fission-independent compartmentalization of mitochondria during budding yeast cell division. J Cell Biol 223(4).
PMID: 38488722
Pineau RM, et al. (2024) Emergence and maintenance of stable coexistence during a long-term multicellular evolution experiment. Nat Ecol Evol.
PMID: 38486107
Lino BR and Van Deventer JA (2024) Genome-Wide Screen for Enhanced Noncanonical Amino Acid Incorporation in Yeast. Methods Mol Biol 2760: 219-251.
PMID: 38468092
Razdaibiedina A, et al. (2024) PIFiA: self-supervised approach for protein functional annotation from single-cell imaging data. Mol Syst Biol.
PMID: 38472305
Eskandari A, et al. (2024) Recent insight into the advances and prospects of microbial lipases and their potential applications in industry. Int Microbiol.
PMID: 38489100
Muramoto M, et al. (2024) Coordinated regulation of phosphatidylinositol 4-phosphate and phosphatidylserine levels by Osh4p and Osh5p is an essential regulatory mechanism in autophagy. Biochim Biophys Acta Biomembr 1866(4): 184308.
PMID: 38437942
Wu Z and Sinha S (2024) SPREd: a simulation-supervised neural network tool for gene regulatory network reconstruction. Bioinform Adv 4(1): vbae011.
PMID: 38444538
Takallou S, et al. (2024) Hydrogen peroxide sensitivity connects the activity of COX5A and NPR3 to the regulation of YAP1 expression. FASEB J 38(5): e23439.
PMID: 38416461
Yang H, et al. (2024) Widespread stable noncanonical peptides identified by integrated analyses of ribosome profiling and ORF features. Nat Commun 15(1): 1932.
PMID: 38431639
Liao H, et al. (2024) Genome-wide identification of resistance genes and response mechanism analysis of key gene knockout strain to catechol in Saccharomyces cerevisiae. Front Microbiol 15: 1364425.
PMID: 38450166
Kang N, et al. (2024) General autophagy-dependent and -independent lipophagic processes collaborate to regulate the overall level of lipophagy in yeast. Autophagy.
PMID: 38425021
Isogai S, et al. (2024) Functional analysis of feedback inhibition-insensitive aspartate kinase identified in a threonine-accumulating mutant of Saccharomyces cerevisiae. Appl Environ Microbiol e0015524.
PMID: 38456673
Niphadkar S, et al. (2024) The PP2A-like phosphatase Ppg1 mediates assembly of the Far complex to balance gluconeogenic outputs and enables adaptation to glucose depletion. PLoS Genet 20(3): e1011202.
PMID: 38452140
Jiang L, et al. (2024) Identification of the Beta Subunit Fas1p of Fatty Acid Synthetase as an Interacting Partner of Yeast Calcium/Calmodulin-Dependent Protein Kinase Cmk2p Through Mass Spectrometry Analysis. Appl Biochem Biotechnol.
PMID: 38411936
Shiino H, et al. (2024) Chemical inhibition of phosphatidylcholine biogenesis reveals its role in mitochondrial division. iScience 27(3): 109189.
PMID: 38420588
Guan Y, et al. (2024) Assess different fermentation characteristics of 54 lager yeasts based on group classification. Food Microbiol 120: 104479.
PMID: 38431325
Borem FM, et al. (2024) Fermentation of coffee fruit with sequential inoculation of Lactiplantibacillus plantarum and Saccharomyces cerevisiae: effect on sensory attributes and chemical composition of the beans. Food Chem 446: 138820.
PMID: 38430763
Castor RB, et al. (2024) Exploring fungal bioemulsifiers: insights into chemical composition, microbial sources, and cross-field applications. World J Microbiol Biotechnol 40(4): 127.
PMID: 38451356
Gierke AM and Hessling M (2024) Photoinactivation by UVA radiation and visible light of Candida auris compared to other fungi. Photochem Photobiol Sci.
PMID: 38446403
de Sousa Cutrim TA, et al. (2024) New thymol-derived triazole exhibits promising activity against Trichophyton rubrum. Braz J Microbiol.
PMID: 38453819
Wenkang H, et al. (2024) Influence of acid-reducing Saccharomyces cerevisiae on the microbial communities and metabolites of Suanyu. Food Res Int 181: 114117.
PMID: 38448112
Cahoon CK and Hawley RS (2016) Regulating the construction and demolition of the synaptonemal complex. Nat Struct Mol Biol 23(5): 369-77.
PMID: 27142324
Kamada Y, et al. (2024) Structure-based engineering of Tor complexes reveals that two types of yeast TORC1 produce distinct phenotypes. J Cell Sci 137(4).
PMID: 38415789
Zhang C, et al. (2024) Engineering and transcriptome study of Saccharomyces cerevisiae to produce ginsenoside compound K by glycerol. Biotechnol J 19(2): e2300383.
PMID: 38403397
Sadeghi SA, et al. (2024) Pilot Evaluation of the Long-Term Reproducibility of Capillary Zone Electrophoresis-Tandem Mass Spectrometry for Top-Down Proteomics of a Complex Proteome Sample. J Proteome Res.
PMID: 38417052
Carter Z, et al. (2024) Sequestrase chaperones protect against oxidative stress-induced protein aggregation and [PSI+] prion formation. PLoS Genet 20(2): e1011194.
PMID: 38422160
Waite KA, et al. (2024) Proteasome condensate formation is driven by multivalent interactions with shuttle factors and ubiquitin chains. Proc Natl Acad Sci U S A 121(10): e2310756121.
PMID: 38408252
Rajaratnam S, et al. (2024) Integrated Multi-Omics Analysis and Validation in Yeast Model of Amyotrophic Lateral Sclerosis. Methods Mol Biol 2761: 397-419.
PMID: 38427252
Li H, et al. (2024) Bidirectional substrate shuttling between the 26S proteasome and the Cdc48 ATPase promotes protein degradation. Mol Cell.
PMID: 38401542
Cooper B and Yang R (2024) An assessment of AcquireX and Compound Discoverer software 3.3 for non-targeted metabolomics. Sci Rep 14(1): 4841.
PMID: 38418855
Sasaki S, et al. (2024) Protein sorting upon exit from the endoplasmic reticulum dominates Golgi biogenesis in budding yeast. FEBS Lett.
PMID: 38395606
Galka D, et al. (2024) Inhibition of 26S proteasome activity by alpha-synuclein is mediated by the proteasomal chaperone Rpn14/PAAF1. Aging Cell e14128.
PMID: 38415292
Jiang W, et al. (2024) Exploring engineering strategies that enhance de novo production of exotic cyclopropane fatty acids in Saccharomyces cerevisiae. Biotechnol J 19(2): e2300694.
PMID: 38403410
(2024) Corrigendum to: Ebselen induces reactive oxygen species (ROS)-mediated cytotoxicity in Saccharomyces cerevisiae with inhibition of glutamate dehydrogenase being a target https://doi.org/10.1016/j.fob.2014.01.002. FEBS Open Bio.
PMID: 38425299
Su B, et al. (2024) Global rewiring of lipid metabolism to produce carotenoid by deleting the transcription factor genes ino2/ino4 in Saccharomyces cerevisiae. Int J Biol Macromol 264(Pt 1): 130400.
PMID: 38412934
Moreira-Ramos S, et al. (2024) Screening of native Saccharomyces cerevisiae strains from Chile for beer production. Front Microbiol 15: 1345324.
PMID: 38404599
Chaudhary BP, et al. (2024) Reconstitution and resonance assignments of yeast OST subunit Ost4 and its critical mutant Ost4V23D in liposomes by solid-state NMR. J Biomol NMR.
PMID: 38421550
Chen G, et al. (2024) Biosynthetic pathway of prescription cucurbitacin IIa and high-level production of key triterpenoid intermediates in engineered yeast and tobacco. Plant Commun 100835.
PMID: 38425040
David KT, et al. (2024) Saccharomycotina yeasts defy long-standing macroecological patterns. Proc Natl Acad Sci U S A 121(10): e2316031121.
PMID: 38412132
Mota MN, et al. (2024) Shared and more specific genetic determinants and pathways underlying yeast tolerance to acetic, butyric, and octanoic acids. Microb Cell Fact 23(1): 71.
PMID: 38419072
Allen GE, et al. (2021) Not4 and Not5 modulate translation elongation by Rps7A ubiquitination, Rli1 moonlighting, and condensates that exclude eIF5A. Cell Rep 36(9): 109633.
PMID: 34469733
Harper CS, et al. (2023) Temporal control of contact site formation reveals a relationship between mitochondrial division and Num1-mediated mitochondrial tethering. Mol Biol Cell 34(11): ar108.
PMID: 37585290
Kao CY, et al. (2021) Evidence for complex dynamics during U2 snRNP selection of the intron branchpoint. Nucleic Acids Res 49(17): 9965-9977.
PMID: 34387687
Arul Nambi Rajan A, et al. (2024) Gle1 is required for tRNA to stimulate Dbp5 ATPase activity in vitro and promote Dbp5-mediated tRNA export in vivo in Saccharomyces cerevisiae. Elife 12.
PMID: 38189406
Kriegenburg F, et al. (2022) The lipid flippase Drs2 regulates anterograde transport of Atg9 during autophagy. Autophagy Rep 1(1): 345-367.
PMID: 38106996
González Montoro A, et al. (2021) Subunit exchange among endolysosomal tethering complexes is linked to contact site formation at the vacuole. Mol Biol Cell 32(22): br14.
PMID: 34668759
Ferdoush J, et al. (2020) An F-Box Protein, Mdm30, Interacts with TREX Subunit Sub2 To Regulate Cellular Abundance Cotranscriptionally in Orchestrating mRNA Export Independently of Splicing and Mitochondrial Function. Mol Cell Biol 40(7).
PMID: 31932480
Yousif D, et al. (2024) Anti-Cariogenic Effects of S. cerevisiae and S. boulardii in S. mutans-C. albicans Cross-Kingdom In Vitro Models. Pharmaceutics 16(2).
PMID: 38399269
Bittner E, et al. (2024) Proteins that carry dual targeting signals can act as tethers between peroxisomes and partner organelles. PLoS Biol 22(2): e3002508.
PMID: 38377076
Ayano T and Oki M (2024) IMD2, which is located near the boundary of heterochromatin regions, is regulated by the use of multiple HAT-related factors. Genes Genet Syst.
PMID: 38382924
Gao Q, et al. (2024) Enhancing (2S)-naringenin production in Saccharomyces cerevisiae by high-throughput screening method based on ARTP mutagenesis. 3 Biotech 14(3): 85.
PMID: 38379664
Goncalves D, et al. (2024) Cytoplasmic redox imbalance in the thioredoxin system activates Hsf1 and results in hyperaccumulation of the sequestrase Hsp42 with misfolded proteins. Mol Biol Cell mbcE23070296.
PMID: 38381577
Zhang S, et al. (2024) Systems Metabolic Engineering of Saccharomyces cerevisiae for the High-Level Production of (2S)-Eriodictyol. J Fungi (Basel) 10(2).
PMID: 38392791
Jonak K, et al. (2024) Ageing-dependent thiol oxidation reveals early oxidation of proteins with core proteostasis functions. Life Sci Alliance 7(5).
PMID: 38383455
Narvaez-Ortiz HY, et al. (2024) Both Las17 binding sites on Arp2/3 complex are important for branching nucleation and assembly of functional endocytic actin networks in S. cerevisiae. J Biol Chem 105766.
PMID: 38367669
Murai T, et al. (2024) Replication fork blocking deficiency leads to a reduction of rDNA copy number in budding yeast. iScience 27(3): 109120.
PMID: 38384843
Qin N, et al. (2024) Increased CO(2) fixation enables high carbon-yield production of 3-hydroxypropionic acid in yeast. Nat Commun 15(1): 1591.
PMID: 38383540
Yang M, et al. (2024) Employing bimodal representations to predict DNA bendability within a self-supervised pre-trained framework. Nucleic Acids Res.
PMID: 38375921
Jiang L, et al. (2024) Amino acid metabolism and MAP kinase signaling pathway play opposite roles in the regulation of ethanol production during fermentation of sugarcane molasses in budding yeast. Genomics 116(2): 110811.
PMID: 38387766
Li H, et al. (2024) Recurrent evolutionary switches of mitochondrial cytochrome c maturation systems in Archaeplastida. Nat Commun 15(1): 1548.
PMID: 38378784
Kim JH, et al. (2024) Multiple roles for the cytoplasmic C-terminal domains of the yeast cell surface receptors Rgt2 and Snf3 in glucose sensing and signaling. Sci Rep 14(1): 4055.
PMID: 38374219
Zhang MM, et al. (2024) Differential Protein Expression in Set5p-Mediated Acetic Acid Stress Response and Novel Targets for Engineering Yeast Stress Tolerance. J Proteome Res.
PMID: 38396335
Singh AK, et al. (2024) Efficient assembly of a synthetic attenuated SARS-CoV-2 genome in Saccharomyces cerevisiae using multi-copy yeast vectors. J Genet 103.
PMID: 38379228
Safar HA, et al. (2024) Three Rounds of Read Correction Significantly Improve Eukaryotic Protein Detection in ONT Reads. Microorganisms 12(2).
PMID: 38399651
Huffines AK and Schneider DA (2024) Hmo1 Promotes Efficient Transcription Elongation by RNA Polymerase I in Saccharomyces cerevisiae. Genes (Basel) 15(2).
PMID: 38397236
Bakir G, et al. (2024) Saccharomyces cerevisiae CellWall Remodeling in the Absence of Knr4 and Kre6 Revealed by Nano-FourierTransform Infrared Spectroscopy. Appl Spectrosc 37028231213658.
PMID: 38378014
Lu M and Billerbeck S (2024) Improving homology-directed repair by small molecule agents for genetic engineering in unconventional yeast?-Learning from the engineering of mammalian systems. Microb Biotechnol 17(2): e14398.
PMID: 38376092
Suda K, et al. (2024) Plasma membrane damage limits replicative lifespan in yeast and induces premature senescence in human fibroblasts. Nat Aging.
PMID: 38388781
Utomo JC, et al. (2024) Reconstructing curcumin biosynthesis in yeast reveals the implication of caffeoyl-shikimate esterase in phenylpropanoid metabolic flux. Metab Eng.
PMID: 38387678
Rios EI, et al. (2024) Insights into Hsp90 mechanism and in vivo functions learned from studies in the yeast, Saccharomyces cerevisiae. Front Mol Biosci 11: 1325590.
PMID: 38389899
Xie D, et al. (2024) Study on the effect of calcium signal participating in the antioxidant mechanism of yeast under high sugar environment. J Sci Food Agric.
PMID: 38390983
Norris AC, et al. (2024) Flipping the script: Advances in understanding how and why P4-ATPases flip lipid across membranes. Biochim Biophys Acta Mol Cell Res 1871(4): 119700.
PMID: 38382846
Zhang YG, et al. (2024) Identification of Flo11-like Adhesin in Schizosaccharomyces pombe and the Mechanism of Small-Molecule Compounds Mediating Biofilm Formation in Yeasts. Microorganisms 12(2).
PMID: 38399762
Riaz M, et al. (2024) Autophagy related genes mediated mitophagy in yeast, mammals and higher plants. Cell Mol Biol (Noisy-le-grand) 70(1): 1-11.
PMID: 38372120
Miscicka A, et al. (2024) Ribosomal collision is not a prerequisite for ZNF598-mediated ribosome ubiquitination and disassembly of ribosomal complexes by ASCC. Nucleic Acids Res.
PMID: 38366554
Joshi K, et al. (2024) An evolutionarily conserved phosphoserine-arginine salt bridge in the interface between ribosomal proteins uS4 and uS5 regulates translational accuracy in Saccharomyces cerevisiae. Nucleic Acids Res.
PMID: 38340338
Boob AG, et al. (2024) CRISPR-COPIES: an in silico platform for discovery of neutral integration sites for CRISPR/Cas-facilitated gene integration. Nucleic Acids Res.
PMID: 38346683
Singh SK, et al. (2024) Noncanonical interaction with microtubules via the N-terminal nonmotor domain is critical for the functions of a bidirectional kinesin. Sci Adv 10(6): eadi1367.
PMID: 38324691
Suzuki SW, et al. (2024) A role for Vps13-mediated lipid transfer at the ER-endosome contact site in ESCRT-mediated sorting. J Cell Biol 223(4).
PMID: 38319250
Huang M, et al. (2024) Engineered Saccharomyces cerevisiae harbors xylose isomerase and xylose transporter improves co-fermentation of xylose and glucose for ethanol production. Prep Biochem Biotechnol 1-10.
PMID: 38349751
Tsouris A, et al. (2024) Diallel panel reveals a significant impact of low-frequency genetic variants on gene expression variation in yeast. Mol Syst Biol.
PMID: 38355920
Costa V and Teixeira V (2024) Vacuolar ATPase-mediated regulation of neutral lipid dynamics: Insights into lipid droplet homeostasis and stress response mechanisms. Biochim Biophys Acta Mol Cell Biol Lipids 1869(3): 159465.
PMID: 38350538
Lee M and Fraaije MW (2024) Equipping Saccharomyces cerevisiae with an Additional Redox Cofactor Allows F(420)-Dependent Bioconversions in Yeast. ACS Synth Biol.
PMID: 38346396
Alvarez-Guerra I, et al. (2024) LDO proteins and Vac8 form a vacuole-lipid droplet contact site to enable starvation-induced lipophagy in yeast. Dev Cell.
PMID: 38354739
Cap M and Palkova Z (2024) The characteristics of differentiated yeast subpopulations depend on their lifestyle and available nutrients. Sci Rep 14(1): 3681.
PMID: 38355943
Shachar R, et al. (2024) Dissecting the sequence and structural determinants guiding m6A deposition and evolution via inter- and intra-species hybrids. Genome Biol 25(1): 48.
PMID: 38360609
Wang Y, et al. (2024) Enhancement of ester biosynthesis in blueberry wines through co-fermentation via cell-cell contact between Torulaspora delbrueckii and Saccharomyces cerevisiae. Food Res Int 179: 114029.
PMID: 38342548
Durrieu L, et al. (2024) Protocol for FRAP-based estimation of nuclear import and export rates in single yeast cells. STAR Protoc 5(1): 102876.
PMID: 38349788
Muhlhofer M, et al. (2024) Deletion of the transcription factors Hsf1, Msn2 and Msn4 in yeast uncovers transcriptional reprogramming in response to proteotoxic stress. FEBS Lett.
PMID: 38366111
Byun S, et al. (2024) Structure, cooperativity and inhibition of the inosine 5'-monophosphate-specific phosphatase from Saccharomyces cerevisiae. FEBS J.
PMID: 38362806
Karpel JE (2024) Caenorhabditis elegansddx-15 helicase fails to complement loss of Prp43p in Saccharomyces cerevisiae. MicroPubl Biol 2024.
PMID: 38344068
Rzad K, et al. (2024) Targeting yeast topoisomerase II by imidazo and triazoloacridinone derivatives resulting in their antifungal activity. Sci Rep 14(1): 3594.
PMID: 38351313