Author: Jansen R

References 18 references

Download References (.nbib)

Lin N, et al. (2004) Information assessment on predicting protein-protein interactions. BMC Bioinformatics 5:154 PMID:15491499
Xia Y, et al. (2004) Analyzing cellular biochemistry in terms of molecular networks. Annu Rev Biochem 73:1051-87 PMID:15189167
Jansen R, et al. (2003) Revisiting the codon adaptation index from a whole-genome perspective: analyzing the relationship between gene expression and codon occurrence in yeast using a variety of models. Nucleic Acids Res 31(8):2242-51 PMID:12682375
Jansen R, et al. (2003) A Bayesian networks approach for predicting protein-protein interactions from genomic data. Science 302(5644):449-53 PMID:14564010
Edwards AM, et al. (2002) Bridging structural biology and genomics: assessing protein interaction data with known complexes. Trends Genet 18(10):529-36 PMID:12350343
Gerstein M, et al. (2002) Proteomics. Integrating interactomes. Science 295(5553):284-7 PMID:11786630
Greenbaum D, et al. (2002) Analysis of mRNA expression and protein abundance data: an approach for the comparison of the enrichment of features in the cellular population of proteins and transcripts. Bioinformatics 18(4):585-96 PMID:12016056
Jansen R, et al. (2002) Integration of genomic datasets to predict protein complexes in yeast. J Struct Funct Genomics 2(2):71-81 PMID:12836664
Jansen R, et al. (2002) Relating whole-genome expression data with protein-protein interactions. Genome Res 12(1):37-46 PMID:11779829
Kumar A, et al. (2002) Subcellular localization of the yeast proteome. Genes Dev 16(6):707-19 PMID:11914276
Qian J, et al. (2001) PartsList: a web-based system for dynamically ranking protein folds based on disparate attributes, including whole-genome expression and interaction information. Nucleic Acids Res 29(8):1750-64 PMID:11292848
Zhu H, et al. (2001) Global analysis of protein activities using proteome chips. Science 293(5537):2101-5 PMID:11474067
Drawid A, et al. (2000) Genome-wide analysis relating expression level with protein subcellular localization. Trends Genet 16(10):426-30 PMID:11050323
Hurt E, et al. (2000) Mex67p mediates nuclear export of a variety of RNA polymerase II transcripts. J Biol Chem 275(12):8361-8 PMID:10722667
Jansen R and Gerstein M (2000) Analysis of the yeast transcriptome with structural and functional categories: characterizing highly expressed proteins. Nucleic Acids Res 28(6):1481-8 PMID:10684945
Ross-Macdonald P, et al. (1999) Large-scale analysis of the yeast genome by transposon tagging and gene disruption. Nature 402(6760):413-8 PMID:10586881
Jansen R, et al. (1993) A U3 snoRNP protein with homology to splicing factor PRP4 and G beta domains is required for ribosomal RNA processing. EMBO J 12(6):2549-58 PMID:8508778
Tollervey D, et al. (1993) Temperature-sensitive mutations demonstrate roles for yeast fibrillarin in pre-rRNA processing, pre-rRNA methylation, and ribosome assembly. Cell 72(3):443-57 PMID:8431947