Xue H, et al. (2025) Coordinated synthesis of aromatic amino acid derived pigments in yeast via global transcriptional engineering. Microb Cell Fact 24(1):174
PMID: 40745325
Benito-Castellanos A, et al. (2025) Biodiversity of Yeast Species Isolated During Spontaneous Fermentation: Influence of Grape Origin, Vinification Conditions, and Year of Study. Microorganisms 13(7)
PMID: 40732217
Bolzico BC, et al. (2025) Glucose receptor deletion and engineering: impact on xylose sensing and utilization in Saccharomyces cerevisiae. FEMS Yeast Res
PMID: 40728911
Pal R, et al. (2025) Motifs in the histone H3 and H4 and chromatin modifying factors are crucial to regulate the multifactorial zinc response pathway in Saccharomyces cerevisiae. Arch Biochem Biophys 110571
PMID: 40721097
Shin Y, et al. (2025) ATP hydrolysis-driven structural transitions within the S. cerevisiae Rad51 and Dmc1 nucleoprotein filaments. J Biol Chem 110528
PMID: 40721016
Fortuin J and den Haan R (2025) Identifying promoters to enhance heterologous gene expression in recombinant Saccharomyces cerevisiae strains cultivated on non-native substrates. Appl Microbiol Biotechnol 109(1):173
PMID: 40715790
Zhang C, et al. (2025) Screening of High-Yield 2-Phenylethanol Producing Strain from Wild-Type <i>Saccharomyces cerevisiae</i> and Optimization of Fermentation Parameters. Foods 14(14)
PMID: 40724265
Deveryshetty J, et al. (2025) Mechanism of Rad51 filament formation by Rad52 and Rad55-Rad57 in homologous recombination. Nat Commun 16(1):6685
PMID: 40691144
Rödl S, et al. (2025) A protein-specific priority code in presequences determines the efficiency of mitochondrial protein import. PLoS Biol 23(7):e3003298
PMID: 40690527
Zhang Y, et al. (2025) Pre-harvest microbial Interventions: Impact on disease prevention, fermentation dynamics, and wine aroma in grape cultivation. Curr Res Food Sci 11:101132
PMID: 40689291
Jacquel B, et al. (2025) A trade-off between stress resistance and tolerance underlies the adaptive response to hydrogen peroxide. Cell Syst 16(7):101320
PMID: 40685522
Stelljes JT and Klostermeier D (2025) Conformations of the three gates in S. cerevisiae topoisomerase II and their response to DNA, nucleotide and etoposide. J Biol Chem 110495
PMID: 40683446
Stukey GJ, et al. (2025) Active site determinants of yeast Pah1 phosphatidate phosphatase activity and cellular functions. J Biol Chem 110492
PMID: 40680843
Rayevsky A, et al. (2025) Structural Flexibility and Shape Similarity Contribute to Exclusive Functions of Certain Atg8 Isoforms in the Autophagy Process. Mol Inform 44(7):e202500025
PMID: 40677112
Kaur U, et al. (2025) Autoinhibition imposed by a large conformational switch of INO80 regulates nucleosome positioning. Science 389(6757):eadr3831
PMID: 40674492
Woyda-Ploszczyca AM (2025) Nucleoside diphosphate kinase strongly promotes GDP and ADP metabolism in the cell and affects endogenous proton leak in mitochondria - the kinase is hampered by oxidative phosphorylation inhibitors. J Enzyme Inhib Med Chem 40(1):2520611
PMID: 40673704
Fafard-Couture É, et al. (2025) SnoBIRD: a tool to identify C/D box snoRNAs and refine their annotation across all eukaryotes. Nucleic Acids Res 53(14)
PMID: 40737086
Feng T, et al. (2025) Mechanisms and Strategies for Engineering Oxidative Stress Resistance in <i>Saccharomyces cerevisiae</i>. Chem Bio Eng 2(7):409-422
PMID: 40735014
Urbonavičius J, et al. (2025) Role of <i>Saccharomyces cerevisiae</i> Fcy Proteins and Their Homologs in the Catabolism of Modified Heterocyclic Pyrimidine Bases. Microorganisms 13(7)
PMID: 40732016
Wang D, et al. (2025) Enhanced Production of Santalols by Engineering the Cytochrome P450 Enzyme to the Peroxisomal Surface in Yeast. J Agric Food Chem
PMID: 40730492
Zhu X, et al. (2025) Artificial chromosome reorganization reveals high plasticity of the budding and fission yeast genomes. Genome Biol 26(1):229
PMID: 40731013
Shukla A, et al. (2025) The wheat VIH2-3B, a functional PPIP5K controls the localization of fasciclin-like arabinogalactan protein. Adv Biol Regul 97:101103
PMID: 40730046
McNeill J, et al. (2025) Impacts of temperature on recombination rate and meiotic success in thermotolerant and cold-tolerant yeast species. Heredity (Edinb)
PMID: 40715475
Sawai A, et al. (2025) ATP Supply from Cytosol to Mitochondria Is an Additional Role of Aerobic Glycolysis to Prevent Programmed Cell Death by Maintenance of Mitochondrial Membrane Potential. Metabolites 15(7)
PMID: 40710561
Speijer D (2025) Complex Interplay of Metabolic Substrates, Points of Entry into the Mitochondrial Electron Chain, and ROS Generation: A critical analysis of "Active control of mitochondrial network morphology by metabolism-driven redox state" by Singh et al. and studies replacing ETC components with yeast counterparts. Bioessays e70045
PMID: 40697051
Ilioaia O, et al. (2025) The CST complex mediates a post-resection non-homologous end joining repair pathway and promotes local deletions in Saccharomyces cerevisiae. Cell Genom 100947
PMID: 40675158
Lu Z, et al. (2025) Exploiting the Geranylgeranyl-Pyrophosphate-Sensing N-Terminal Domain of HMG-CoA Reductase 2 to Regulate Farnesyl Pyrophosphate Synthase (Erg20p) for Improved Monoterpene Production in Saccharomyces cerevisiae. Yeast
PMID: 40686049
Vijayraghavan S, et al. (2025) Methylglyoxal mutagenizes single-stranded DNA via Rev1-associated slippage and mispairing. Nucleic Acids Res 53(14)
PMID: 40705923
Lon JR, et al. (2025) Peroxisomal Compartmentalization of the Methylerythritol-4-phosphate Pathway Alleviates Cellular Stress and Enhances Geraniol Production in <i>Saccharomyces cerevisiae</i>. ACS Synth Biol
PMID: 40701839
Rossio V and Paulo JA (2025) Evaluating Protein Extraction Techniques for Elucidating Proteomic Changes in Yeast Deletion Strains. Proteomes 13(3)
PMID: 40700272
Ito T, et al. (2025) Yeast Model System Showed That Heterologously Expressed Mutant Atp9 Has a Negative Impact on Cell Growth by Causing ATP Depletion. Biol Pharm Bull 48(7):1070-1078
PMID: 40707212
Tan W, et al. (2025) Rational spatial rewiring of key enzymes enhances α-santalene production in Saccharomyces cerevisiae. Bioresour Technol 133027
PMID: 40706763
Mironov AA, et al. (2025) The 50-nm Free Vesicles Visible in <i>Saccharomyces cerevisiae</i> Are Not COPII-Dependent. Curr Issues Mol Biol 47(5)
PMID: 40699735
Yu X, et al. (2025) Evaluation of the effects of <i>Saccharomyces cerevisiae</i> fermentation on the non-volatile compounds in semi-dry coffee beans using widely targeted metabolomics analysis. Food Chem X 29:102781
PMID: 40698374
Su H and Hao N (2025) Computational Systems Biology Approaches to Cellular Aging - Integrating Network Maps and Dynamical Models. Quant Biol 13(4)
PMID: 40697249
Ibrahim B (2025) A minimal deterministic model reveals integration of spindle assembly and position checkpoints in mitosis. Sci Rep 15(1):26677
PMID: 40695988
Alder-Rangel A and Rangel DEN (2025) Overview of scientific productivity in the field of fungal stress research. Fungal Biol 129(5):101598
PMID: 40707124
Felizardo G, et al. (2025) The role of Pep4 protease in Cryptococcus neoformans cell survival and virulence factors. Fungal Biol 129(5):101611
PMID: 40707119
Ting TY, et al. (2025) Molecular Genetics and Probiotic Mechanisms of Saccharomyces cerevisiae var. boulardii. Probiotics Antimicrob Proteins
PMID: 40705231
Schweiger M, et al. (2025) A homozygous TRIP13 pathogenic variant associated with familiar oocyte arrest and prematurely condensed sperm chromosomes. Mol Cytogenet 18(1):17
PMID: 40702521
Vanoni M, et al. (2025) A modular model integrating metabolism, growth, and cell cycle predicts that fermentation is required to modulate cell size in yeast populations. PLoS Comput Biol 21(7):e1013296
PMID: 40690530
Yang YX, et al. (2025) Recent advances and multiple strategies for the synthesis of terpenoid fragrances and flavors in model microorganisms. Biotechnol Adv 108646
PMID: 40681126
Isogai S, et al. (2025) Evaluation of synthetic peptides for direct protein delivery into Saccharomyces cerevisiae. Biosci Biotechnol Biochem
PMID: 40690264
Tanahashi R, et al. (2025) A key regulatory region required for the inhibition of proline utilization in the yeast transceptor Can1. Biosci Biotechnol Biochem
PMID: 40690258
Viola E, et al. (2025) Influence of yeast adaptation with bio-activators on the process of wine alcoholic fermentation. Food Microbiol 132:104824
PMID: 40683714
Bai G, et al. (2025) SMAdd-seq: probing chromatin accessibility with small molecule DNA intercalation and nanopore sequencing. Nucleic Acids Res 53(14)
PMID: 40682816
Nilson DJ, et al. (2025) Structural basis for sensitivity and acquired resistance of fungal cap guanine-N7 methyltransferases to the antifungal antibiotic sinefungin. Nucleic Acids Res 53(14)
PMID: 40682821
Ji X, et al. (2025) Label-free isolation of lipid-rich Saccharomyces cerevisiae mutant by high-throughput flow-mode Raman-activated cell sorting and multi-omics analysis for uncovering the mechanism of enhanced lipid accumulation. Biotechnol Biofuels Bioprod 18(1):75
PMID: 40676605
Giotopoulou I, et al. (2025) Exploitation of Saccharomyces cerevisiae as an alternative microencapsulation strategy of thymol via β-glucan based matrix for the development of multilayer LDPE active packaging films - comparison with zeolite- and activated carbon-based carriers. Int J Biol Macromol 146017
PMID: 40675304
Zou L, et al. (2025) Identification and characterization of a prokaryotic Mannosyl-oligosaccharide Glucosidase (MOGS) and establishment of a functional complementation assay for MOGS activity. Biochem Biophys Res Commun 778:152331
PMID: 40674822
Chen Y, et al. (2025) Novel Equivalent Carbon Number Strategy for Large-Scale Lipidomics Data Analysis via Ultrahigh-Performance Liquid Chromatography-Orbitrap Astral Mass Spectrometry. Anal Chem
PMID: 40673892
Sahu SR, et al. (2025) Enzymatic and Structural Roles of Candida albicans Rev1 in DNA Damage Response and Disseminated Candidiasis. Mol Microbiol
PMID: 40671667
Han Y, et al. (2025) Fusion of microscopic and diffraction images with VGG net for budding yeast recognition in imaging flow cytometry. Sci Rep 15(1):25820
PMID: 40670500
Yamazaki Y, et al. (2025) Time-resolved transcriptomics of S. cerevisiae and S. pastorianus in response to plasma membrane stresses. Sci Data 12(1):1246
PMID: 40670401
Di Z, et al. (2025) Progress in the Biosynthesis of Cosmetic Ingredients through Engineering of <i>Saccharomyces cerevisiae</i>. ACS Synth Biol
PMID: 40670299
Sun J, et al. (2025) Metabolic engineering of <i>Saccharomyces cerevisiae</i> for <i>de novo</i> biosynthesis of hydroxytyrosol and salidroside. Appl Environ Microbiol e0071225
PMID: 40668011
Blatch GL and Edkins AL (2025) New insights into Sti1/Hop's cochaperone function highlight the complexity of proteostatic regulation. FEBS J 292(14):3629-3633
PMID: 40259657
Futai E, et al. (2025) Saccharomyces cerevisiae Models of Alzheimer's Disease to Screen Genes, Mutations, and Chemicals Affecting Amyloid Beta Production by γ-Secretase. J Vis Exp
PMID: 40658746
Adhikary S, et al. (2025) Isolation of Mitochondria From Yeast to Estimate Mitochondrial Pools of Inorganic Phosphate. Bio Protoc 15(13):e5370
PMID: 40655426
Badugu S, et al. (2025) Assessing the Efficiency of Double-Strand Break Repair Mediated by Homologous Recombination and Non-homologous End-Joining Pathways in <i>Saccharomyces cerevisiae</i>. Bio Protoc 15(13):e5378
PMID: 40655411
Park S, et al. (2025) Epigenetic regulation of intracellular branched-chain amino acid homeostasis maintains a normal lifespan. iScience 28(7):112846
PMID: 40655096
García-Martínez J, et al. (2025) Global changes in synthesis rates and mRNA stabilities during adaptive responses to cell wall stress in yeast. Sci Rep 15(1):25260
PMID: 40651991
Rodríguez-Sotres R, et al. (2025) Yeast hexokinase inactivation by lead and its reversion by magnesium as one possible aspect of lead toxicity. J Inorg Biochem 272:112983
PMID: 40651332
Vakirlis N and Fuqua T (2025) Intergenic polyA/T tracts explain the propensity of yeast de novo genes to encode transmembrane domains. J Evol Biol
PMID: 40650590
Ruchala J, et al. (2025) Regulation of Riboflavin Biosynthesis in Microorganisms and Construction of the Advanced Overproducers of This Vitamin. Int J Mol Sci 26(13)
PMID: 40650021
Faz-Cortez OA, et al. (2025) Maltose and Maltotriose Transporters in Brewer's <i>Saccharomyces</i> Yeasts: Polymorphic and Key Residues in Their Activity. Int J Mol Sci 26(13)
PMID: 40649723
Wienkers H, et al. (2025) Substrate binding and coupled mechanisms of Vps4p substrate recruitment and release from autoinhibition. Sci Rep 15(1):25024
PMID: 40646008
Mishra S, et al. (2025) Understanding the molecular basis of the mutation in the RNA polymerase III subunit Rpc10 (R41W)- associated with hypomyelinating leukodystrophy in the yeast homolog Rpc11. Biochem Biophys Res Commun 777:152310
PMID: 40651364
Zhang J, et al. (2025) Fe-deficiency-induced chlorosis 1 is essential for chloroplast iron transport and homeostasis under continuous light conditions in Arabidopsis. Cell Rep 44(7):115942
PMID: 40650908
Pinheiro SS, et al. (2025) Exploring the Aroma Profile of Traditional Sparkling Wines: A Review on Yeast Selection in Second Fermentation, Aging, Closures, and Analytical Strategies. Molecules 30(13)
PMID: 40649338
Baldisseri A, et al. (2025) A Novel PCR-Based Tool to Trace Oenological <i>Saccharomyces cerevisiae</i> Yeast by Monitoring Strain-Specific Nucleotide Polymorphisms. Foods 14(13)
PMID: 40647131
Costantini A, et al. (2025) Exploring the Influence of Different <i>Saccharomyces cerevisiae</i> Strains and Hop Varieties on Beer Composition and Sensory Profiles. Foods 14(13)
PMID: 40647109
Zhou H, et al. (2025) Screening for High-Yielding Pyruvate and Acetaldehyde Yeasts and Their Application in Improving the Stability of Anthocyanin in Mulberry Wine. Foods 14(13)
PMID: 40647030
Nardone C, et al. (2025) A heterotrimeric protein complex assembles the metazoan V-ATPase upon dissipation of proton gradients. Nat Struct Mol Biol
PMID: 40646309
Opalek M, et al. (2025) Assessing methods for estimating microbial lag phase duration: a comparative analysis using Saccharomyces cerevisiae empirical and simulated data. FEMS Yeast Res 25
PMID: 40643251
Sánchez-Briones LA, et al. (2025) Isa2p is essential in <i>Saccharomyces cerevisiae</i> for mitochondrial function and stress resistance by allowing Rip1p subunit assembly into cytochrome <i>bc</i><sub>1</sub> complex. J Biosci 50
PMID: 40642800
Mérida-Cerro JA, et al. (2025) Cellular imbalance of specific RNA-binding proteins associates with harmful R-loops. PLoS Genet 21(7):e1011491
PMID: 40601718
Singh S and Hinnebusch AG (2025) SAGA subunits Spt3 and Spt8 act directly and non-redundantly with TFIID in TBP recruitment in the Gcn4 transcriptome. Nucleic Acids Res 53(13)
PMID: 40637224
Case KC, et al. (2025) Valproate independently activates Snf1, inhibits TORC1, and induces repression of INO1 transcription by increasing nuclear localization of Opi1. Sci Rep 15(1):24601
PMID: 40634329
Carlström A, et al. (2025) A molecular switch at the yeast mitoribosomal tunnel exit controls cytochrome b synthesis. Nucleic Acids Res 53(13)
PMID: 40637229
Lamping JP and Krebber H (2025) The hidden power of antisense long non-coding RNAs: a dive into a novel regulatory layer mediated by double-stranded RNA formation. RNA Biol 22(1):1-16
PMID: 40629869
Miller-Fleming L, et al. (2025) Clu1/Clu form mitochondria-associated granules upon metabolic transitions and regulate mitochondrial protein translation via ribosome interactions. PLoS Genet 21(7):e1011773
PMID: 40623095
Gómez M, et al. (2025) High-Throughput Indirect Monitoring of TORC1 Activation Using the pTOMAN-G Plasmid in Yeast. Bio Protoc 15(12):e5356
PMID: 40620813
Bremer A, et al. (2025) Reconciling competing models on the roles of condensates and soluble complexes in transcription factor function. Mol Cell
PMID: 40614721
Hakim SE, et al. (2025) Phylogenomics and metabolic engineering reveal a conserved gene cluster in Solanaceae plants for withanolide biosynthesis. Nat Commun 16(1):6367
PMID: 40640164
Xiao XY, et al. (2025) Regulatory mechanism of Haa1p and Hap4p in Saccharomyces cerevisiae to mixed acetic acid and formic acid when fermenting mixed glucose and xylose. Microb Cell Fact 24(1):156
PMID: 40616060
Draper-Barr G, et al. (2025) Sla2 is a core interaction hub for clathrin light chain and the Pan1/End3/Sla1 complex. Structure 33(7):1193-1207.e5
PMID: 40347949
Biswas S and D'Silva P (2025) Ubp2 modulates DJ-1-mediated redox-dependent mitochondrial dynamics in Saccharomyces cerevisiae. PLoS Genet 21(7):e1011353
PMID: 40608842
Medina-Suárez S and Machín F (2025) Continuous nuclear envelope surveillance is required for DNA double strand break repair. Commun Biol 8(1):984
PMID: 40604292
Barman P and Bhaumik SR (2025) An Intrinsically Disordered Region of the FACT Subunit, Spt16, Promotes Chromatin Disassembly in Stimulating the Pre-Initiation Complex Formation at the Promoter for Transcription Initiation <i>In Vivo</i>. Mol Cell Biol 45(7):263-282
PMID: 40405832
Wüstner D, et al. (2025) Dynamic mode decomposition for analysis and prediction of metabolic oscillations from time-lapse imaging of cellular autofluorescence. Sci Rep 15(1):23489
PMID: 40603986
Moser S, et al. (2025) A screening approach unveils an unknown Mn<sup>2+</sup>-dependent endopolyphosphatase activity in yeast. Chem Sci
PMID: 40607052
Britton SJ, et al. (2025) Quorum sensing in Saccharomyces cerevisiae brewing strains: effects of 2-phenylethanol on proteomic, lipidomic, and metabolomic profile. FEMS Yeast Res 25
PMID: 40622978
Maia L, et al. (2025) Unveiling the influence of autochthonous yeasts selected from spontaneous fermentation of cachaça on ethanol, ester and fermentation kinetics. Antonie Van Leeuwenhoek 118(8):104
PMID: 40622601
Chan WY, et al. (2025) An Improved m6A-ELISA for Quantifying <i>N<sup>6</sup></i> -methyladenosine in Poly(A)-purified mRNAs. Bio Protoc 15(12):e5359
PMID: 40620807
Liu J, et al. (2025) Novel function of ribosomal protein RPL14B: regulation of CdSe quantum dots biosynthesis in living Saccharomyces cerevisiae cells. Microb Cell Fact 24(1):152
PMID: 40604988
Khattab SMR, et al. (2025) Engineering Saccharomyces cerevisiae for ethanol production from glycerol, xylose, acetic acid, and glucose. Bioresour Technol 435:132921
PMID: 40602668
Li J, et al. (2025) Engineering phenylpyruvate decarboxylase for controlled biosynthesis of aromatic amino acid derivatives. Metab Eng 91:466-479
PMID: 40617266
Langlois-Lemay L and D'Amours D (2025) Yeast centrosomes act as organizing centers to promote Polo kinase-mediated adaptation to persistent DNA damage. Proc Natl Acad Sci U S A 122(27):e2414426122
PMID: 40601630
Kato Y, et al. (2025) Ehg1/May24 stabilizes yeast amino acid permease by facilitating its localization to lipid rafts under high hydrostatic pressure. Mol Biol Cell 36(8):ar100
PMID: 40601413
Berzosa A, et al. (2025) Extraction of yeast cell compounds: Comparing pulsed electric fields with traditional thermal autolysis. Food Res Int 217:116852
PMID: 40597552
Bisinski DD, et al. (2025) Cvm1 and its paralog Cvm2 function as a complex at vacuolar membrane contact sites. Mol Biol Cell mbcE25020089
PMID: 40601406