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    Literature Recently Added to SGD


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    • Alemany K, et al. (2025) Kinesin-8/Kip3 requires beta tubulin tail for depolymerase activity. J Cell Biol 224(10) PMID: 40920139
      • SGD Paper
      • DOI full text
      • PubMed
      12 Associated Entities: CIN8 | BIM1 | STU1 | ASE1 | TUB1 | STU2 | TUB2 | KIP1 | KIP3 | ... Show all KAR3 | tub2-C354S | tub2-430Δ Show fewer

    • Chan C, et al. (2025) Saccharomyces cerevisiae malate dehydrogenase Mdh1p lacking mitochondrial targeting signal can be re-localized to peroxisomes. Biol Open PMID: 40910470
      • SGD Paper
      • DOI full text
      • PubMed
      4 Associated Entities: PEX3 | ALD4 | MDH1 | MDH2 ... Show all Show fewer

    • Chen G, et al. (2025) Multiple Lignocellulosic Inhibitor-Tolerant <i>Saccharomyces cerevisiae</i> Strains Developed by Evolutionary Engineering and CRISPR/Cas9 Gene Editing Technology. J Agric Food Chem PMID: 40905401
      • SGD Paper
      • DOI full text
      • PubMed
      9 Associated Entities: ADR1 | UTH1 | RPS11A | RAD18 | RPS11B | GCN1 | AFI1 | MET22 | PSK2 ... Show all Show fewer

    • El Atab O, et al. (2025) A Yeast-Based In Vivo Assay Complements In Vitro and In Silico Approaches to Characterize Sterol-Binding by Saccharomyces cerevisiae Lam/Ltc Proteins. J Biol Chem 110663 PMID: 40902976
      • SGD Paper
      • DOI full text
      • PubMed
      11 Associated Entities: HEM1 | SAY1 | PRY2 | SIP3 | LAM5 | LAM1 | LAM4 | KES1 | PRY1 | ... Show all LAM6 | YSP2 Show fewer

    • Wu T, et al. (2025) Visualizing Cell Structures with Minecraft. Biophysicist (Rockv) 6(1):37-52 PMID: 40895200
      • SGD Paper
      • DOI full text
      • PMC full text
      • PubMed
    • Hagaggi NSA and Abdul-Raouf UM (2025) Recent trends in microbial production of alkanes. World J Microbiol Biotechnol 41(9):320 PMID: 40892357
      • SGD Paper
      • DOI full text
      • PMC full text
      • PubMed
    • Sanyal MR and Sugiyama T (2025) Biochemical reconstitution of temozolomide-induced mutational processes. J Biol Chem 110676 PMID: 40914245
      • SGD Paper
      • DOI full text
      • PubMed
      3 Associated Entities: DNA polymerase zeta complex | DNA polymerase delta complex | DNA polymerase epsilon complex ... Show all Show fewer

    • Zhang B, et al. (2025) Unveiling the yeast interaction: Insights into the role of Saccharomyces cerevisiae metabolites in regulating Torulaspora delbrueckii aroma biosynthesis during wine fermentation. Int J Food Microbiol 443:111415 PMID: 40913991
      • SGD Paper
      • DOI full text
      • PubMed
    • Plouviez M, et al. (2025) Coming to Terms: The Mechanisms of Overplus and Luxury Phosphorus Uptake for Polyphosphate Storage in Microalgae and Yeast. Biotechnol Bioeng PMID: 40913534
      • SGD Paper
      • DOI full text
      • PubMed
      18 Associated Entities: PHO90 | SYG1 | PHO89 | PHO4 | VTC4 | PHO87 | PHO2 | PPX1 | PHO81 | ... Show all PHO84 | PHO91 | PHO80 | PPN1 | PSR1 | PHO85 | PPN2 | Vacuolar transporter chaperone complex, VTC3 variant | Vacuolar transporter chaperone complex, VTC2 variant Show fewer

    • Adair LR, et al. (2025) Speciation analysis of fungi by liquid atmospheric pressure MALDI mass spectrometry. Anal Bioanal Chem PMID: 40911099
      • SGD Paper
      • DOI full text
      • PubMed
    • Shalev Ezra Y, et al. (2025) High-throughput DNA repair monitoring in Saccharomyces cerevisiae suggests SSB- and DSB-induced chromatin reconfiguration. Sci Rep 15(1):32302 PMID: 40897755
      • SGD Paper
      • DOI full text
      • PMC full text
      • PubMed
      2 Associated Entities: HO | MATALPHA ... Show all Show fewer

    • Guo H, et al. (2026) Dual-phase Hog1 activation and transporter gene reprogramming enable extreme sugar tolerance in food osmophilic yeasts. Food Microbiol 133:104879 PMID: 40889845
      • SGD Paper
      • DOI full text
      • PubMed
      15 Associated Entities: HXT10 | HXT3 | FLR1 | PMA1 | HXT4 | ATP16 | SOD2 | STL1 | FCY2 | ... Show all DAL5 | HOG1 | IRC21 | SSU1 | FDH1 | NDE1 Show fewer

    • Tripplehorn SA, et al. (2025) A direct interaction between the Chd1 CHCT domain and Rtf1 controls Chd1 distribution and nucleosome positioning on active genes. Nucleic Acids Res 53(16) PMID: 40867051
      • SGD Paper
      • DOI full text
      • PMC full text
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      2 Associated Entities: RTF1 | CHD1 ... Show all Show fewer

    • Duan B, et al. (2025) Widespread epistasis shapes RNA polymerase II active site function and evolution. Nat Commun 16(1):7993 PMID: 40866334
      • SGD Paper
      • DOI full text
      • PMC full text
      • PubMed
      3 Associated Entities: RPO21 | RPB2 | DNA-directed RNA polymerase II complex ... Show all Show fewer

    • Rathore S, et al. (2025) The late stages of yeast mitoribosome large subunit biogenesis. Biochim Biophys Acta Mol Cell Res 1872(8):120051 PMID: 40865570
      • SGD Paper
      • DOI full text
      • PubMed
      9 Associated Entities: MRH4 | MRPL6 | MTG2 | MRPL16 | MRP35 | MRPL39 | 21S_RRNA | MTG1 | RTC6 ... Show all Show fewer

    • Elizondo BR and Saa PA (2025) Complex Kinetic Models Predict β-Carotene Production and Reveal Flux Limitations in Recombinant <i>Saccharomyces cerevisiae</i> Strains. ACS Synth Biol PMID: 40891387
      • SGD Paper
      • DOI full text
      • PubMed
      7 Associated Entities: ERG20 | ERG12 | ERG13 | ERG9 | HMG1 | ERG10 | HMG2 ... Show all Show fewer

    • Pan L, et al. (2025) A Granularity-related Network Refinement Method Based on Module Division and Biological Information for Identifying Essential Proteins. IEEE Trans Comput Biol Bioinform PP PMID: 40864574
      • SGD Paper
      • DOI full text
      • PubMed
    • Miozzari G, et al. (1977) Action of tryptophan analogues in Saccharomyces cerevisiae. Arch Microbiol 115(3):307-16 PMID: 341826
      • SGD Paper
      • DOI full text
      • PubMed
      2 Associated Entities: TRP2 | TRP3 ... Show all Show fewer

    • Khannanov RA, et al. (2025) Ribosome in Baker's Yeast Mitochondria are Heterogeneous. Biochemistry (Mosc) 90(8):1099-1115 PMID: 40886390
      • SGD Paper
      • DOI full text
      • PubMed
      8 Associated Entities: MRP20 | MRPL6 | MRP1 | RSM10 | MRPS17 | MSS51 | MRPL8 | PET111 ... Show all Show fewer

    • Zadali R, et al. (2025) Ribosomal protein Rps29/uS14 contributes to 18S rRNA maturation and its abundance regulates osmotic stress response in S. cerevisiae. Nucleic Acids Res 53(16) PMID: 40884398
      • SGD Paper
      • DOI full text
      • PMC full text
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      2 Associated Entities: RPS29B | RPS29A ... Show all Show fewer

    • Schiemann AH, et al. (2025) Functional Analysis of the Yeast Counterpart to the Human GCN2 p.Glu738_Asp739insArgArg Variant. MicroPubl Biol 2025 PMID: 40880988
      • SGD Paper
      • DOI full text
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      4 Associated Entities: GCN2 | gcn2-RRins | gcn2-DEins | gcn2-RRsub ... Show all Show fewer

    • Khaiwal S, et al. (2025) Predicting natural variation in the yeast phenotypic landscape with machine learning. Mol Syst Biol PMID: 40890427
      • SGD Paper
      • DOI full text
      • PubMed
      11 Associated Entities: SPO12 | IME1 | CUP1-2 | CDC23 | SEC11 | SKN7 | YEL023C | ENA2 | ENA1 | ... Show all AIM29 | CAC2 Show fewer

    • Tzamourani A, et al. (2026) Enhancing the aromatic profile and sensory properties of wine via interactions between Zygosaccharomyces bailii and Saccharomycescerevisiae. Food Microbiol 133:104902 PMID: 40889872
      • SGD Paper
      • DOI full text
      • PubMed
    • Gallo A, et al. (2026) Impact of oxygen supplementation during fermentation on yeast gene expression and thiol release in wine. Food Microbiol 133:104881 PMID: 40889847
      • SGD Paper
      • DOI full text
      • PubMed
      7 Associated Entities: GAP1 | OPT1 | IRC7 | STR3 | DAL5 | OPT2 | PTR2 ... Show all Show fewer

    • Yang P, et al. (2025) Engineered <i>Saccharomyces cerevisiae</i> for the Enhancement of Glucosamine Accumulation by the Consumption of Glucose and Ammonium Based on Synthetic Biological Pathways. Foods 14(16) PMID: 40870696
      • SGD Paper
      • DOI full text
      • PMC full text
      • PubMed
      5 Associated Entities: PCM1 | GNA1 | PFK1 | PDB1 | ISR1 ... Show all Show fewer

    • McGough IJ, et al. (2018) SNX3-retromer requires an evolutionary conserved MON2:DOPEY2:ATP9A complex to mediate Wntless sorting and Wnt secretion. Nat Commun 9(1): 3737. PMID: 30213940
      • SGD Paper
      • DOI full text
      • PMC full text
      • PubMed
      1 Associated Entity: NEO1-DOP1-MON2 golgi transporter complex ... Show all Show fewer

    • Shang X, et al. (2025) Machine learning driven semi-automated framework for yeast sporulation efficiency quantification using ilastik segmentation and Fiji nuclear enumeration. Fungal Genet Biol 180:104024 PMID: 40876769
      • SGD Paper
      • DOI full text
      • PubMed
    • Ali S, et al. (2025) Investigating E, E-farnesol production unleashed by an indigenous Saccharomyces cerevisiae isolated from baker's yeast under stationary culture. J Microbiol Methods 237:107240 PMID: 40876491
      • SGD Paper
      • DOI full text
      • PubMed
    • Guo S, et al. (2025) Enhancing Astaxanthin Biosynthesis in Synthetic Yeast Through Combinatorial Metabolic Engineering and Genome-Scale Evolution. ACS Synth Biol PMID: 40875908
      • SGD Paper
      • DOI full text
      • PubMed
      5 Associated Entities: ROX1 | DGK1 | HMG1 | PAH1 | IDI1 ... Show all Show fewer

    • Chen J, et al. (2025) Automated segmentation of soft X-ray tomography: native cellular structure with sub-micron resolution at high throughput for whole-cell quantitative imaging in yeast. Mol Biol Cell mbcE24100486 PMID: 40875368
      • SGD Paper
      • DOI full text
      • PubMed
    • Ayres-Galhardo PH, et al. (2025) Protocol for Disome-seq to identify transcriptome-wide ribosome collisions in yeast cells. STAR Protoc 6(3):104047 PMID: 40875289
      • SGD Paper
      • DOI full text
      • PMC full text
      • PubMed
    • He X and Lu H (2025) Evolution and Applications of Genome-Scale Metabolic Models in Yeast Systems Biology Studies. FEMS Yeast Res PMID: 40874759
      • SGD Paper
      • DOI full text
      • PubMed
    • Sansom BJM, et al. (2025) Mutational analysis of Yih1 and IMPACT reveals amino acids required for Gcn2 inhibition. FEBS Lett PMID: 40862493
      • SGD Paper
      • DOI full text
      • PubMed
      6 Associated Entities: YIH1 | GCN1 | yih1-D102A,E106A | yih1-D102A | yih1-E106A | yih1-E108A ... Show all Show fewer

    • Arndt M, et al. (2025) Structural basis for lipid transport at membrane contact sites by the IST2-OSH6 complex. Nat Struct Mol Biol PMID: 40866577
      • SGD Paper
      • DOI full text
      • PubMed
      3 Associated Entities: PSD1 | IST2 | OSH6 ... Show all Show fewer

    • Sasikumar S, et al. (2025) Interaction of genetic variants activates latent metabolic pathways in yeast. Nat Commun 16(1):8014 PMID: 40866353
      • SGD Paper
      • DOI full text
      • PMC full text
      • PubMed
      20 Associated Entities: ADY2 | RPL4B | RPL13A | RPL14B | LEU1 | ARG3 | ENA1 | OAC1 | NCE103 | ... Show all ARG8 | CIT3 | RPL22A | RTC6 | ARG1 | ARG4 | ARG56 | TAO3 | MKT1 | mkt1-D30G | tao3-E1493Q Show fewer

    • Cerezo EL, et al. (2025) Ribosome biogenesis and homeostasis: in the front line to cope with cellular stress. Biochimie PMID: 40865789
      • SGD Paper
      • DOI full text
      • PubMed
    • Jiménez-Ramírez IA, et al. (2025) Small Nucleolar RNA from <i>S. cerevisiae</i> Binds to Phosphatidylinositol 4,5-Bisphosphate. Noncoding RNA 11(4) PMID: 40863722
      • SGD Paper
      • DOI full text
      • PMC full text
      • PubMed
      1 Associated Entity: SNR191 ... Show all Show fewer

    • Wang Y, et al. (2025) Progress in the Synthesis of Sterols and Related Natural Products by Manipulating the Ergosterol Biosynthetic Pathway in <i>Saccharomyces cerevisiae</i>. ACS Synth Biol PMID: 40859817
      • SGD Paper
      • DOI full text
      • PubMed
      37 Associated Entities: UPC2 | TGL1 | ERG25 | ARE1 | ERG8 | ZWF1 | ACS2 | ERG26 | ACS1 | ... Show all ERG7 | ERG4 | ERG20 | ERG12 | ERG28 | ERG11 | ERG1 | ERG2 | ERG24 | ERG13 | ALD6 | MOT3 | ACC1 | ARE2 | ERG5 | GND1 | ERG9 | YEH1 | ROX1 | ECM22 | HMG1 | ERG10 | HMG2 | IDI1 | ERG27 | ERG3 | YEH2 | POS5 Show fewer

    • Wu M, et al. (2025) Bipartite Recognition of Tail-Anchored Proteins by Sgt2 Involves both the Cytosolic and Transmembrane Domains. Biochemistry 64(16):3549-3558 PMID: 40752011
      • SGD Paper
      • DOI full text
      • PubMed
      6 Associated Entities: SBH1 | SBH2 | PEP12 | YSY6 | MDY2 | SGT2 ... Show all Show fewer

    • Djeghmoum Y and Piazza A (2025) Donor transcription suppresses D-loops in cis and promotes genome stability. EMBO J PMID: 40859034
      • SGD Paper
      • DOI full text
      • PubMed
      12 Associated Entities: CYC8 | MPH1 | RNH1 | RPO21 | SRS2 | RDH54 | DST1 | SGS1 | MFT1 | ... Show all MSH2 | RecQ helicase-Topo III complex | DNA-directed RNA polymerase II complex Show fewer

    • Corbett AH (2025) End of the line: a kinetic ruler model for poly(A) tail termination. Genes Dev PMID: 40858502
      • SGD Paper
      • DOI full text
      • PubMed
    • Zink S, et al. (2025) Leveraging structure-informed machine learning for fast steric zipper propensity prediction across whole proteomes. PLoS Comput Biol 21(8):e1013395 PMID: 40853992
      • SGD Paper
      • DOI full text
      • PMC full text
      • PubMed
      1 Associated Entity: CRH1 ... Show all Show fewer

    • Attfield PV, et al. (2025) Perspectives on current and future yeast technologies for ethanol-based biofuels and bioproducts. FEMS Yeast Res PMID: 40853686
      • SGD Paper
      • DOI full text
      • PubMed
    • Nielsen S and Zenkin N (2025) Efficient termination of transcription by RNA polymerase I requires a conserved hairpin of the ribosomal RNA precursor. Sci Adv 11(34):eadw2470 PMID: 40834087
      • SGD Paper
      • DOI full text
      • PMC full text
      • PubMed
      4 Associated Entities: RPA12 | NSI1 | REB1 | DNA-directed RNA Polymerase I complex ... Show all Show fewer

    • Kim S, et al. (2025) Insight into meiotic DNA end resection: Mechanisms and regulation. DNA Repair (Amst) 153:103886 PMID: 40850049
      • SGD Paper
      • DOI full text
      • PubMed
      20 Associated Entities: SPO11 | TEL1 | MEC1 | RAD51 | MRE11 | RAD50 | DNA2 | SAE2 | RAD24 | ... Show all DMC1 | XRS2 | SGS1 | EXO1 | RAD17 | MEC3 | DDC1 | HED1 | FUN30 | MRX double-strand break repair complex | Rad17-Mec3-Ddc1 checkpoint clamp complex Show fewer

    • Gabs E, et al. (2025) A kinetic ruler controls mRNA poly(A) tail length. Genes Dev PMID: 40846642
      • SGD Paper
      • DOI full text
      • PubMed
      2 Associated Entities: NAB2 | Cleavage and polyadenylation specificity factor complex ... Show all Show fewer

    • Bartolutti C, et al. (2025) UPR deficiency leads to poor growth, aneuploidy, and a trade-off between ER and general proteostasis in yeast. Genes Dev PMID: 40846641
      • SGD Paper
      • DOI full text
      • PubMed
      13 Associated Entities: EUG1 | HRD3 | HSP104 | SBH1 | KAR2 | HAC1 | SBH2 | IRE1 | ROT1 | ... Show all IRC22 | ire1-cLDΔ | ire1-bipless | ire1-R537Q Show fewer

    • Fang G, et al. (2025) Laser-emitting aqueous bioreactors for ultrasensitive bioactivity analysis. Proc Natl Acad Sci U S A 122(34):e2425829122 PMID: 40844762
      • SGD Paper
      • DOI full text
      • PMC full text
      • PubMed
    • Shukla A, et al. (2025) Cigarette smoke impairs the endocytotic process in <i>Saccharomyces cerevisiae</i>. Toxicol Res (Camb) 14(4):tfaf127 PMID: 40843274
      • SGD Paper
      • DOI full text
      • PMC full text
      • PubMed
      6 Associated Entities: EDE1 | MSS4 | TUB3 | SLA1 | FET3 | END3 ... Show all Show fewer

    • Ramírez-Aguirre E, et al. (2025) Structural disorder and distinctive motifs in the C-terminal region of the MADS-domain transcription factors are conserved across diverse taxa. PLoS One 20(8):e0330098 PMID: 40844982
      • SGD Paper
      • DOI full text
      • PMC full text
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      4 Associated Entities: RLM1 | SMP1 | ARG80 | MCM1 ... Show all Show fewer

    • Gummadi ASC and Yella VR (2025) DNA Sequence Perplexity Reveals Evolutionarily Conserved Patterns in cis-Regulatory Regions Across Diverse Species. Biochem Genet PMID: 40841702
      • SGD Paper
      • DOI full text
      • PubMed
    • Martín-García FJ, et al. (2025) Yeast proteomics: Advances and applications in alcoholic fermentation. Microbiol Res 301:128318 PMID: 40840037
      • SGD Paper
      • DOI full text
      • PubMed
      22 Associated Entities: MET14 | HSP12 | SOD1 | TDH3 | TDH1 | CDC19 | TDH2 | CWP1 | HSP31 | ... Show all ERG11 | SOD2 | HSP26 | AHP1 | TSA1 | HSP60 | ADH1 | ERG5 | TRX2 | GND1 | ERG6 | ILV5 | TRX1 Show fewer

    • Nostramo R and Hopper AK (2025) Protocol for inducible expression of small non-coding RNAs using a tet-on system in Saccharomyces cerevisiae. STAR Protoc 6(3):104037 PMID: 40839434
      • SGD Paper
      • DOI full text
      • PubMed
    • Nauerz C, et al. (2025) Biogenesis and function of the mitochondrial solute carrier (SLC25) family in yeast. Biol Chem PMID: 40836422
      • SGD Paper
      • DOI full text
      • PubMed
      42 Associated Entities: AAC3 | MRS4 | CTP1 | YIA6 | TIM17 | MRX20 | GGC1 | YMC2 | MIR1 | ... Show all HEM25 | TIM22 | YEA6 | SFC1 | TPC1 | PIC2 | PET9 | LEU5 | MTM1 | MRS3 | OAC1 | FLX1 | ORT1 | ODC2 | UGO1 | ANT1 | MRX21 | AGC1 | RIM2 | YHM2 | SAL1 | MME1 | ODC1 | PET8 | CRC1 | AAC1 | DIC1 | FSF1 | YMC1 | TIM22 mitochondrial inner membrane twin-pore carrier translocase complex | TOM40 mitochondrial outer membrane translocase holocomplex | TIM9-TIM10 mitochondrial intermembrane space protein transporter complex | TIM8-TIM13 mitochondrial intermembrane space protein transporter complex Show fewer

    • White LK, et al. (2025) Nanopore sequencing of intact aminoacylated tRNAs. Nat Commun 16(1):7781 PMID: 40835813
      • SGD Paper
      • DOI full text
      • PMC full text
      • PubMed
      3 Associated Entities: TAN1 | TRM44 | MET22 ... Show all Show fewer

    • Blum TB, et al. (2025) Subtomogram averages of mitochondrial ATP synthase dimers from plants show a conserved extra density at the peripheral stalk. IUCrJ 12(Pt 5):563-569 PMID: 40838373
      • SGD Paper
      • DOI full text
      • PMC full text
      • PubMed
      1 Associated Entity: Mitochondrial proton-transporting ATP synthase complex ... Show all Show fewer

    • Robertson CG, et al. (2025) Role of Gα-MAPK interaction in mating of <i>Saccharomyces cerevisiae</i>. Mol Biol Cell mbcE23090362 PMID: 40833811
      • SGD Paper
      • DOI full text
      • PubMed
      11 Associated Entities: FAR1 | FUS3 | GPA1 | STE4 | STE5 | BNI1 | far1-H7 | ste4-T318A,T320A,T322A,S335A | ste18-3A | ... Show all gpa1-K21E,R22E | ste5-ND Show fewer

    • Sontag EM (2025) Immunostaining the Yeast Nuclear Membrane for Imaging by Super-Resolution Fluorescence Microscopy. Methods Mol Biol 2958:83-98 PMID: 40833568
      • SGD Paper
      • DOI full text
      • PubMed
    • Mohseni A, et al. (2025) Kingdom-wide CRISPR guide design with ALLEGRO. Nucleic Acids Res 53(15) PMID: 40829801
      • SGD Paper
      • DOI full text
      • PMC full text
      • PubMed
    • Sachweh J, et al. (2025) The small GTPase Ran defines nuclear pore complex asymmetry. Cell PMID: 40829587
      • SGD Paper
      • DOI full text
      • PubMed
      2 Associated Entities: MOT2 | Nuclear pore complex ... Show all Show fewer

    • Zhang T, et al. (2025) Comparative Proteomic Analysis of Capillary and Micropillar Array Columns Using DIA: Insights from the TKO Yeast Standard. J Proteome Res 24(9):4845-4851 PMID: 40829030
      • SGD Paper
      • DOI full text
      • PubMed
      3 Associated Entities: MET6 | URA2 | PFK2 ... Show all Show fewer

    • Dutca LM, et al. (2025) Yeast pre-rRNA is processed at the A' site. MicroPubl Biol 2025 PMID: 40821957
      • SGD Paper
      • DOI full text
      • PMC full text
      • PubMed
      9 Associated Entities: RRP6 | ETS1-1 | ETS1-2 | ETS2-1 | ETS2-2 | RDN37-1 | RDN37-2 | SNR17B | SNR17A ... Show all Show fewer

    • Friedman NS, et al. (2025) Saccharomyces cerevisiae as a Model for Reprogramming of Eukaryotic Cells: Implications for the Study of the Relationship Between Metabolism and Inflammation in Chronic Disease. Cell Biochem Biophys PMID: 40825904
      • SGD Paper
      • DOI full text
      • PubMed
    • M Yu K and J Cowen L (2025) Exploring weighting schemes for the discovery of informative generalized between pathway models to uncover pathways in genetic interaction networks. Sci Rep 15(1):30169 PMID: 40825844
      • SGD Paper
      • DOI full text
      • PMC full text
      • PubMed
      35 Associated Entities: SYS1 | COG1 | GUT2 | PEX4 | VPS35 | PEX8 | PEX2 | PEX1 | PEX3 | ... Show all DOA1 | COG3 | COG7 | IML1 | PEX10 | RAV1 | COG2 | IRS4 | VPS29 | KIP3 | YFH7 | ERV14 | COG4 | BTS1 | PEX13 | KIN1 | COG6 | COG5 | NUP120 | MDM31 | MSN4 | COG8 | DIA2 | REV1 | REV3 | REV7 Show fewer

    • Sarkar P, et al. (2025) Possible regulatory network and associated pathways governing the expression of ADH2 in Saccharomyces cerevisiae. Curr Genet 71(1):15 PMID: 40824391
      • SGD Paper
      • DOI full text
      • PubMed
      39 Associated Entities: CYR1 | ADR1 | CCR4 | REG1 | TPK3 | SIP1 | SNF4 | RIM15 | GPA2 | ... Show all RGT2 | TOS3 | GAL83 | SCH9 | BCY1 | TPK1 | ZNF1 | GLN3 | HAP4 | SPT6 | SIP2 | MIG1 | SPT10 | CAT8 | CRZ1 | ADH2 | SAK1 | GLC7 | PKH3 | ELM1 | SNF1 | PKH2 | PKH1 | PHO85 | RAS1 | RAS2 | TPK2 | CCR4-NOT mRNA deadenylase complex | TORC1 serine/threonine-protein kinase complex, TOR1 variant | TORC1 serine/threonine-protein kinase complex, TOR2 variant Show fewer

    • Holland KL, et al. (2025) RNA Polymerase III Promoters Compatible with CRISPR Gene Regulation in <i>Saccharomyces cerevisiae</i>. ACS Synth Biol PMID: 40824237
      • SGD Paper
      • DOI full text
      • PubMed
      3 Associated Entities: SNR52 | RPR1 | ZOD1 ... Show all Show fewer

    • Wechsler T, et al. (2025) A time-resolved framework for the recruitment of mRNP processing and assembly factors to a site of transcription. Nucleic Acids Res 53(15) PMID: 40823808
      • SGD Paper
      • DOI full text
      • PMC full text
      • PubMed
      3 Associated Entities: YRA1 | YHS7 | STO1 ... Show all Show fewer

    • Pang X, et al. (2025) Development of a highly efficient <i>p</i>-coumaric acid-responsive biosensor in <i>Saccharomyces cerevisiae</i>. Synth Syst Biotechnol 10(4):1284-1293 PMID: 40821659
      • SGD Paper
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      3 Associated Entities: BST1 | CCW12 | ERG9 ... Show all Show fewer

    • Jiang L, et al. (2025) Expression of CMK2 is controlled by the general stress-response transcriptional factor Msn2 through a single STRE site in budding yeast. Biochim Biophys Acta Gene Regul Mech 1868(4):195107 PMID: 40816512
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      • DOI full text
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      32 Associated Entities: ADR1 | PHO4 | SUM1 | CAD1 | FLO8 | OAF1 | DAL81 | RPH1 | CUP2 | ... Show all UGA3 | CST6 | SPT10 | RPN4 | CMK2 | RFX1 | CRZ1 | DAL82 | SIN3 | HIR2 | HFI1 | SWI4 | STP1 | SMP1 | TUP1 | GCR2 | MSN2 | RGM1 | SIP3 | HAA1 | SFP1 | PPR1 | AFT2 Show fewer

    • Alvarado-Cartagena YM, et al. (2025) Protocol for 4D live fluorescence microscopy to image rapid cellular responses in yeast. STAR Protoc 6(3):104026 PMID: 40815568
      • SGD Paper
      • DOI full text
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      • PubMed
    • Jain R, et al. (2025) Multivalent interaction induces phase separation and formation of more toxic aggregates of α-syn in a yeast model of Parkinson's disease. Protein Sci 34(9):e70253 PMID: 40815456
      • SGD Paper
      • DOI full text
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    • Li J and Pickart CM (1995) Binding of phenylarsenoxide to Arg-tRNA protein transferase is independent of vicinal thiols. Biochemistry 34(48):15829-37 PMID: 7495814
      • SGD Paper
      • DOI full text
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      5 Associated Entities: ATE1 | ate1-C23A | ate1-C20S | ate1-C20S,C23A | ate1-C94S,C95A ... Show all Show fewer

    • Kumar A, et al. (2025) Arginyltransferase1 drives a mitochondria-dependent program to induce cell death. Cell Death Dis 16(1):622 PMID: 40818972
      • SGD Paper
      • DOI full text
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      15 Associated Entities: NUC1 | KAR2 | SOD1 | CYC3 | RIP1 | SOD2 | MCA1 | NDI1 | NHP6A | ... Show all UMP1 | NDE1 | AAC3 | ATE1 | PET9 | AIF1 Show fewer

    • Teng X, et al. (2025) Matrix regulation: a plug-and-tune method for combinatorial regulation in Saccharomyces cerevisiae. Nat Commun 16(1):7624 PMID: 40817118
      • SGD Paper
      • DOI full text
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      20 Associated Entities: CAN1 | HEM3 | TRP2 | ERG8 | HEM14 | HEM1 | ERG20 | ERG12 | HEM2 | ... Show all HEM13 | HEM12 | ERG13 | ADE2 | MVD1 | FAA1 | HMG1 | ERG10 | LYP1 | HEM15 | HEM4 Show fewer

    • Pellet J, et al. (2025) Replication program of a single-chromosome budding yeast strain. Nucleic Acids Res 53(15) PMID: 40808303
      • SGD Paper
      • DOI full text
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    • Joshi A, et al. (2025) Mitochondrial dysfunction and lipid dysregulation in yeast lacking phosphatidylserine. Mol Biol Cell mbcE25030128 PMID: 40802260
      • SGD Paper
      • DOI full text
      • PubMed
      3 Associated Entities: PSD2 | PSD1 | CHO1 ... Show all Show fewer

    • Caballero D, et al. (2025) The yeast Mkt1/Pbp1 complex promotes adaptive responses to respiratory growth. J Cell Biol 224(10) PMID: 40801888
      • SGD Paper
      • DOI full text
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      11 Associated Entities: SCH9 | COX2 | POR1 | KOG1 | MRP51 | PUF3 | MKT1 | PBP1 | TORC1 serine/threonine-protein kinase complex, TOR1 variant | ... Show all TORC1 serine/threonine-protein kinase complex, TOR2 variant | mkt1-D30G Show fewer

    • Basu S, et al. (2025) Shared regulatory factors influencing mRNA translation rate and half-life in yeast. J Biomol Struct Dyn 1-15 PMID: 40801284
      • SGD Paper
      • DOI full text
      • PubMed
    • Zheng B, et al. (2025) Translational fidelity and longevity are genetically linked. Nat Commun 16(1):7521 PMID: 40804252
      • SGD Paper
      • DOI full text
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      • PubMed
      1 Associated Entity: VPS70 ... Show all Show fewer

    • Bharati M, et al. (2025) Arv1 interacts with and regulates the first step of GPI biosynthesis in Candida albicans. FEBS J PMID: 40801327
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      • DOI full text
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      1 Associated Entity: ARV1 ... Show all Show fewer

    • Hohl M, et al. (2025) Structure guided functional analysis of the S. cerevisiae Mre11 complex. Nat Commun 16(1):7469 PMID: 40796731
      • SGD Paper
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      4 Associated Entities: MRE11 | RAD50 | XRS2 | MRX double-strand break repair complex ... Show all Show fewer

    • Baquero Pérez M, et al. (2025) Intergenic accumulation of RNAPII maintains the potential for swift transcriptional restart upon release from quiescence. Genome Res PMID: 40796281
      • SGD Paper
      • DOI full text
      • PubMed
      16 Associated Entities: ADY2 | YER084W | YJL215C | RPL35B | SPG1 | ICL1 | SNT2 | PDR3 | SIP18 | ... Show all RAP1 | GRE1 | TMA10 | DDR2 | DPC7 | RPO21 | DNA-directed RNA polymerase II complex Show fewer

    • Li Z, et al. (2025) Engineering of high-precision C-to-G base editors with expanded site selectivity and target compatibility. Nucleic Acids Res 53(15) PMID: 40795957
      • SGD Paper
      • DOI full text
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      • PubMed
    • Chakraborty T, et al. (2025) DensePPI-2: a bio-inspired update for sequence-based PPI prediction leveraging mutation rates. Brief Bioinform 26(4) PMID: 40794945
      • SGD Paper
      • DOI full text
      • PMC full text
      • PubMed
    • Duari S, et al. (2025) Protocol for cellular age prediction in yeast and human single cells using transfer learning. STAR Protoc 6(3):104023 PMID: 40794494
      • SGD Paper
      • DOI full text
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      • PubMed
    • Nie S, et al. (2025) Biosynthesis of irregular monoterpene lavandulol in <i>Saccharomyces cerevisiae</i>. Synth Syst Biotechnol 10(4):1267-1274 PMID: 40792074
      • SGD Paper
      • DOI full text
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      8 Associated Entities: CIT2 | ERG8 | ERG20 | ERG12 | MLS1 | HMG1 | ERG10 | IDI1 ... Show all Show fewer

    • Kressler D (2025)
      • SGD Paper
    • Ochoa-Valdez MJ, et al. (2025) Characterization of the carboxy-terminal domain of the GPN-loop GTPase Npa3 reveals an intrinsically disordered region and phosphorylation-dependent regulation in the absence of BUD27. FEBS J PMID: 40788873
      • SGD Paper
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      2 Associated Entities: NPA3 | BUD27 ... Show all Show fewer

    • Hospet R, et al. (2025) Improvement of autochthonous Saccharomyces cerevisiae by rapid laboratory evolution technique of genome shuffling. Biosci Rep PMID: 40785630
      • SGD Paper
      • DOI full text
      • PubMed
    • Kishkevich A, et al. (2025) YTK Display-and-Secrete: Screening for Optimal Protein Secretion Elements in <i>Saccharomyces cerevisiae</i>. ACS Synth Biol PMID: 40785119
      • SGD Paper
      • DOI full text
      • PubMed
      3 Associated Entities: AGA2 | AGA1 | MEL1 ... Show all Show fewer

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