Author: Karp RM

References 12 references

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Bruckner S, et al. (2010) Topology-free querying of protein interaction networks. J Comput Biol 17(3):237-52 PMID:20377443
Hannum G, et al. (2009) Genome-wide association data reveal a global map of genetic interactions among protein complexes. PLoS Genet 5(12):e1000782 PMID:20041197
Suthram S, et al. (2008) eQED: an efficient method for interpreting eQTL associations using protein networks. Mol Syst Biol 4:162 PMID:18319721
Narayanan M and Karp RM (2007) Comparing protein interaction networks via a graph match-and-split algorithm. J Comput Biol 14(7):892-907 PMID:17803369
Scott J, et al. (2006) Efficient algorithms for detecting signaling pathways in protein interaction networks. J Comput Biol 13(2):133-44 PMID:16597231
Sharan R, et al. (2005) Identification of protein complexes by comparative analysis of yeast and bacterial protein interaction data. J Comput Biol 12(6):835-46 PMID:16108720
Sharan R, et al. (2005) Conserved patterns of protein interaction in multiple species. Proc Natl Acad Sci U S A 102(6):1974-9 PMID:15687504
Gat-Viks I, et al. (2004) Reconstructing chain functions in genetic networks. Pac Symp Biocomput 498-509 PMID:14992528
Xing EP, et al. (2004) Logos: a modular bayesian model for de novo motif detection. J Bioinform Comput Biol 2(1):127-54 PMID:15272436
Kelley BP, et al. (2003) Conserved pathways within bacteria and yeast as revealed by global protein network alignment. Proc Natl Acad Sci U S A 100(20):11394-9 PMID:14504397
Xing EP, et al. (2003) LOGOS: a modular Bayesian model for de novo motif detection. Proc IEEE Comput Soc Bioinform Conf 2:266-76 PMID:16452802
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Fasulo D, et al. (1999) An algorithmic approach to multiple complete digest mapping. J Comput Biol 6(2):187-207 PMID:10421522