Gambacorta FV, et al. (2022) Comparative functional genomics identifies an iron-limited bottleneck in a Saccharomyces cerevisiae strain with a cytosolic-localized isobutanol pathway. Synth Syst Biotechnol 7(2):738-749 PMID:35387233
Vanacloig-Pedros E, et al. (2022) Comparative chemical genomic profiling across plant-based hydrolysate toxins reveals widespread antagonism in fitness contributions. FEMS Yeast Res 21(1) PMID:35883225
Stoneman HR, et al. (2020) CRISpy-Pop: A Web Tool for Designing CRISPR/Cas9-Driven Genetic Modifications in Diverse Populations. G3 (Bethesda) 10(11):4287-4294 PMID:32963084
Higgins DA, et al. (2018) Natural Variation in the Multidrug Efflux Pump SGE1 Underlies Ionic Liquid Tolerance in Yeast. Genetics 210(1):219-234 PMID:30045857
Peris D, et al. (2017) Hybridization and adaptive evolution of diverse Saccharomyces species for cellulosic biofuel production. Biotechnol Biofuels 10:78 PMID:28360936
Tran TNT, et al. (2017) Metabolic engineering of Saccharomyces cerevisiae to produce a reduced viscosity oil from lignocellulose. Biotechnol Biofuels 10:69 PMID:28331545
Dickinson Q, et al. (2016) Mechanism of imidazolium ionic liquids toxicity in Saccharomyces cerevisiae and rational engineering of a tolerant, xylose-fermenting strain. Microb Cell Fact 15:17 PMID:26790958
McIlwain SJ, et al. (2016) Genome Sequence and Analysis of a Stress-Tolerant, Wild-Derived Strain of Saccharomyces cerevisiae Used in Biofuels Research. G3 (Bethesda) 6(6):1757-66 PMID:27172212
Sato TK, et al. (2016) Correction: Directed Evolution Reveals Unexpected Epistatic Interactions That Alter Metabolic Regulation and Enable Anaerobic Xylose Use by Saccharomyces cerevisiae. PLoS Genet 12(11):e1006447 PMID:27828955
Sato TK, et al. (2016) Directed Evolution Reveals Unexpected Epistatic Interactions That Alter Metabolic Regulation and Enable Anaerobic Xylose Use by Saccharomyces cerevisiae. PLoS Genet 12(10):e1006372 PMID:27741250
Parreiras LS, et al. (2014) Engineering and two-stage evolution of a lignocellulosic hydrolysate-tolerant Saccharomyces cerevisiae strain for anaerobic fermentation of xylose from AFEX pretreated corn stover. PLoS One 9(9):e107499 PMID:25222864
Sato TK, et al. (2014) Harnessing genetic diversity in Saccharomyces cerevisiae for fermentation of xylose in hydrolysates of alkaline hydrogen peroxide-pretreated biomass. Appl Environ Microbiol 80(2):540-54 PMID:24212571
Jin M, et al. (2013) Phenotypic selection of a wild Saccharomyces cerevisiae strain for simultaneous saccharification and co-fermentation of AFEX™ pretreated corn stover. Biotechnol Biofuels 6:108 PMID:23890073
Jin M, et al. (2013) Effect of storage conditions on the stability and fermentability of enzymatic lignocellulosic hydrolysate. Bioresour Technol 147:212-220 PMID:23999256
Wohlbach DJ, et al. (2011) Comparative genomics of xylose-fermenting fungi for enhanced biofuel production. Proc Natl Acad Sci U S A 108(32):13212-7 PMID:21788494
Panda S, et al. (2003) An array of insights: application of DNA chip technology in the study of cell biology. Trends Cell Biol 13(3):151-6 PMID:12628348
Gary JD, et al. (2002) Regulation of Fab1 phosphatidylinositol 3-phosphate 5-kinase pathway by Vac7 protein and Fig4, a polyphosphoinositide phosphatase family member. Mol Biol Cell 13(4):1238-51 PMID:11950935
Nice DC, et al. (2002) Cooperative binding of the cytoplasm to vacuole targeting pathway proteins, Cvt13 and Cvt20, to phosphatidylinositol 3-phosphate at the pre-autophagosomal structure is required for selective autophagy. J Biol Chem 277(33):30198-207 PMID:12048214
Sato TK, et al. (2000) Class C Vps protein complex regulates vacuolar SNARE pairing and is required for vesicle docking/fusion. Mol Cell 6(3):661-71 PMID:11030345
Wurmser AE, et al. (2000) New component of the vacuolar class C-Vps complex couples nucleotide exchange on the Ypt7 GTPase to SNARE-dependent docking and fusion. J Cell Biol 151(3):551-62 PMID:11062257
Sato TK, et al. (1998) Vam7p, a SNAP-25-like molecule, and Vam3p, a syntaxin homolog, function together in yeast vacuolar protein trafficking. Mol Cell Biol 18(9):5308-19 PMID:9710615