Reference: Kirchner J, et al. (2001)
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Abstract
We have performed a systematic structure-function analysis of Saccharomyces cerevisiae TAF25, an evolutionarily conserved, single-copy essential gene which encodes the 206-amino-acid TAF25p protein. TAF25p is an integral subunit of both the 15-subunit general transcription factor TFIID and the multisubunit, chromatin-acetylating transcriptional coactivator SAGA. We used hydroxylamine mutagenesis, targeted deletion, alanine-scanning mutagenesis, high-copy suppression methods, and two-hybrid screening to dissect TAF25. Temperature-sensitive mutant strains generated were used for coimmunoprecipitation and transcription analyses to define the in vivo functions of TAF25p. The results of these analyses show that TAF25p is comprised of multiple mutable elements which contribute importantly to RNA polymerase II-mediated mRNA gene transcription.
- Reference Type
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Journal Article |
Research Support, Non-U.S. Gov't |
Research Support, U.S. Gov't, P.H.S.
- Authors
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Kirchner J,
Sanders SL,
Klebanow E,
Weil PA
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- TAF10 | General transcription factor complex TFIID | DNA-directed RNA polymerase II complex
Gene Ontology Annotations
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| Evidence ID |
Analyze ID |
Gene/Complex |
Systematic Name/Complex Accession |
Qualifier |
Gene Ontology Term ID |
Gene Ontology Term |
Aspect |
Annotation Extension |
Evidence |
Method |
Source |
Assigned On |
Reference |
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| Evidence ID |
Analyze ID |
Gene |
Gene Systematic Name |
Phenotype |
Experiment Type |
Experiment Type Category |
Mutant Information |
Strain Background |
Chemical |
Details |
Reference |
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| Evidence ID |
Analyze ID |
Gene |
Gene Systematic Name |
Disease Ontology Term |
Disease Ontology Term ID |
Qualifier |
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Source |
Assigned On |
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Reference |
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| Evidence ID |
Analyze ID |
Regulator |
Regulator Systematic Name |
Target |
Target Systematic Name |
Direction |
Regulation of |
Happens During |
Regulator Type |
Direction |
Regulation Of |
Happens During |
Method |
Evidence |
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Reference |
Post-translational Modifications
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| Evidence ID |
Analyze ID |
|
Interactor |
Interactor Systematic Name |
Interactor |
Interactor Systematic Name |
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Assay |
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SGA score |
P-value |
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Note |
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| Interactor | Interactor | Assay | Annotation | Action | Modification |
|---|
| SPT15 | TAF10 | Affinity Capture-Western | manually curated | Hit-Bait | No Modification |
| TAF10 | TAF1 | Affinity Capture-Western | manually curated | Bait-Hit | No Modification |
| TAF10 | TAF7 | Affinity Capture-Western | manually curated | Bait-Hit | No Modification |
| TAF10 | TAF8 | Affinity Capture-Western | manually curated | Bait-Hit | No Modification |
| TAF10 | TAF4 | Affinity Capture-Western | manually curated | Bait-Hit | No Modification |
| TAF10 | TAF3 | Affinity Capture-Western | manually curated | Bait-Hit | No Modification |
| TAF10 | TAF11 | Affinity Capture-Western | manually curated | Bait-Hit | No Modification |
| TAF10 | TAF13 | Affinity Capture-Western | manually curated | Bait-Hit | No Modification |
| TAF10 | TAF6 | Affinity Capture-Western | manually curated | Bait-Hit | No Modification |
| TAF10 | TAF9 | Affinity Capture-Western | manually curated | Bait-Hit | No Modification |
Functional Complementation Annotations
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| Complement ID |
Locus ID |
Gene |
Species |
Gene ID |
Strain background |
Direction |
Details |
Source |
Reference |