The budding yeast centromere-kinetochore complex ensures high-fidelity chromosome segregation in mitosis and meiosis by mediating the attachment and movement of chromosomes along spindle microtubules. To identify new genes and pathways whose function impinges on chromosome transmission, we developed a genomic haploinsufficiency modifier screen and used ctf13-30, encoding a mutant core kinetochore protein, as the reference point. We demonstrate through a series of secondary screens that the genomic modifier screen is a successful method for identifying genes that encode nonessential proteins required for the fidelity of chromosome segregation. One gene isolated in our screen was RSC2, a nonessential subunit of the RSC chromatin remodeling complex. rsc2 mutants have defects in both chromosome segregation and cohesion, but the localization of kinetochore proteins to centromeres is not affected. We determined that, in the absence of RSC2, cohesin could still associate with chromosomes but fails to achieve proper cohesion between sister chromatids, indicating that RSC has a role in the establishment of cohesion. In addition, numerous subunits of RSC were affinity purified and a new component of RSC, Rtt102, was identified. Our work indicates that only a subset of the nonessential RSC subunits function in maintaining chromosome transmission fidelity.
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Gene/Complex | Qualifier | Gene Ontology Term | Annotation Extension | Evidence | Source | Assigned On |
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RTT102 | involved in | chromosome segregation | IMP | SGD | 2013-08-07 | |
RTT102 | involved in | chromatin remodeling | IC with RSC-type complex | SGD | 2013-08-07 | |
RTT102 | part of | RSC-type complex | IDA | SGD | 2013-08-07 | |
RSC2 | involved in | chromosome segregation | IGI with CTF13 | SGD | 2013-08-07 | |
RSC2 | involved in | chromosome segregation | IGI with CSE4 | SGD | 2013-08-07 | |
RSC2 | involved in | chromosome segregation | IGI with CBF2 | SGD | 2013-08-07 | |
RSC2 | involved in | chromosome segregation | IGI with OKP1 | SGD | 2013-08-07 | |
RSC2 | involved in | sister chromatid cohesion | IMP | SGD | 2013-08-07 | |
NPL6 | part of | RSC-type complex | IDA | SGD | 2013-08-07 |
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Evidence ID | Analyze ID | Interactor | Interactor Systematic Name | Interactor | Interactor Systematic Name | Allele | Assay | Annotation | Action | Phenotype | SGA score | P-value | Source | Reference | Note |
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Increase the total number of rows showing on this page by using the pull-down located below the table, or use the page scroll at the table's top right to browse through the table's pages; use the arrows to the right of a column header to sort by that column; filter the table using the "Filter" box at the top of the table; click on the small "i" buttons located within a cell for an annotation to view further details about experiment type and any other genes involved in the interaction.
Interactor | Interactor | Assay | Annotation | Action | Modification | |
---|---|---|---|---|---|---|
ARP9 | NPL6 | Affinity Capture-MS | high-throughput | Hit-Bait | No Modification | |
HSP104 | NPL6 | Affinity Capture-MS | high-throughput | Hit-Bait | No Modification | |
HSP104 | RSC2 | Affinity Capture-MS | high-throughput | Hit-Bait | No Modification | |
HTA2 | RSC58 | Affinity Capture-MS | high-throughput | Hit-Bait | No Modification | |
HTA2 | RTT102 | Affinity Capture-MS | high-throughput | Hit-Bait | No Modification | |
NPL6 | ARP7 | Affinity Capture-MS | high-throughput | Bait-Hit | No Modification | |
NPL6 | COG6 | Affinity Capture-MS | high-throughput | Bait-Hit | No Modification | |
NPL6 | HSC82 | Affinity Capture-MS | high-throughput | Bait-Hit | No Modification | |
NPL6 | HTL1 | Affinity Capture-MS | high-throughput | Bait-Hit | No Modification | |
PIM1 | NPL6 | Affinity Capture-MS | high-throughput | Hit-Bait | No Modification |