Reference: Baetz KK, et al. (2004) The ctf13-30/CTF13 genomic haploinsufficiency modifier screen identifies the yeast chromatin remodeling complex RSC, which is required for the establishment of sister chromatid cohesion. Mol Cell Biol 24(3):1232-44

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Abstract


The budding yeast centromere-kinetochore complex ensures high-fidelity chromosome segregation in mitosis and meiosis by mediating the attachment and movement of chromosomes along spindle microtubules. To identify new genes and pathways whose function impinges on chromosome transmission, we developed a genomic haploinsufficiency modifier screen and used ctf13-30, encoding a mutant core kinetochore protein, as the reference point. We demonstrate through a series of secondary screens that the genomic modifier screen is a successful method for identifying genes that encode nonessential proteins required for the fidelity of chromosome segregation. One gene isolated in our screen was RSC2, a nonessential subunit of the RSC chromatin remodeling complex. rsc2 mutants have defects in both chromosome segregation and cohesion, but the localization of kinetochore proteins to centromeres is not affected. We determined that, in the absence of RSC2, cohesin could still associate with chromosomes but fails to achieve proper cohesion between sister chromatids, indicating that RSC has a role in the establishment of cohesion. In addition, numerous subunits of RSC were affinity purified and a new component of RSC, Rtt102, was identified. Our work indicates that only a subset of the nonessential RSC subunits function in maintaining chromosome transmission fidelity.

Reference Type
Journal Article | Research Support, Non-U.S. Gov't | Research Support, U.S. Gov't, P.H.S.
Authors
Baetz KK, Krogan NJ, Emili A, Greenblatt J, Hieter P
Primary Lit For
HTL1 | NPL6 | RSC2 | CTF13 | RTT102 | RSC chromatin remodelling complex, variant RSC2 | RSC chromatin remodelling complex, variant RSC1
Additional Lit For
CBF2 | RSC1 | CTF3 | CSE4 | RSC58

Gene Ontology Annotations 9 entries for 3 genes


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Gene/ComplexQualifierGene Ontology TermAnnotation ExtensionEvidenceSourceAssigned On
RTT102involved inchromosome segregationIMPSGD2013-08-07
RTT102involved inchromatin remodelingIC with RSC-type complexSGD2013-08-07
RTT102part ofRSC-type complexIDASGD2013-08-07
RSC2involved inchromosome segregationIGI with CTF13SGD2013-08-07
RSC2involved inchromosome segregationIGI with CSE4SGD2013-08-07
RSC2involved inchromosome segregationIGI with CBF2SGD2013-08-07
RSC2involved inchromosome segregationIGI with OKP1SGD2013-08-07
RSC2involved insister chromatid cohesionIMPSGD2013-08-07
NPL6part ofRSC-type complexIDASGD2013-08-07
Showing 1 to 9 of 9 entries

Interaction Annotations


Genetic Interactions

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Interactor Interactor Allele Assay Annotation Action Phenotype SGA score P-value Source Reference

Physical Interactions 122 entries for 26 genes

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InteractorInteractorAssayAnnotationActionModification
ARP9NPL6Affinity Capture-MShigh-throughputHit-BaitNo Modification
HSP104NPL6Affinity Capture-MShigh-throughputHit-BaitNo Modification
HSP104RSC2Affinity Capture-MShigh-throughputHit-BaitNo Modification
HTA2RSC58Affinity Capture-MShigh-throughputHit-BaitNo Modification
HTA2RTT102Affinity Capture-MShigh-throughputHit-BaitNo Modification
NPL6ARP7Affinity Capture-MShigh-throughputBait-HitNo Modification
NPL6COG6Affinity Capture-MShigh-throughputBait-HitNo Modification
NPL6HSC82Affinity Capture-MShigh-throughputBait-HitNo Modification
NPL6HTL1Affinity Capture-MShigh-throughputBait-HitNo Modification
PIM1NPL6Affinity Capture-MShigh-throughputHit-BaitNo Modification
Showing 1 to 10 of 122 entries