Reference: Linder T, et al. (2006) The classical srb4-138 mutant allele causes dissociation of yeast Mediator. Biochem Biophys Res Commun 349(3):948-53

Reference Help

Abstract


The Mediator complex is an essential co-activator for RNA polymerase II-dependent transcription in the budding yeast Saccharomyces cerevisiae. The S. cerevisiae core Mediator complex consists of three larger domains that are termed head, middle, and tail. The Med17 subunit is located within the head domain and is essential for cell viability. A temperature-sensitive allele of the MED17 gene known as srb4-138 causes all RNA polymerase II-dependent transcription to cease at the non-permissive temperature. The phenotype of srb4-138 allele has served as the main in vivo proof of the importance of Mediator, but the molecular basis for the effect of this mutant has not been determined. We here characterize Mediator from cells carrying the srb4-138 allele and find that the Mediator complex consistently breaks apart at the head/middle domain boundary even at lower temperatures. We find that both the head and middle domains are able to associate with the RNA polymerase independently of each other. Interestingly, both sub-complexes are able to associate with an active promoter at the permissive temperature but at the non-permissive temperature the head domain is lost from the promoter.

Reference Type
Journal Article
Authors
Linder T, Zhu X, Baraznenok V, Gustafsson CM
Primary Lit For
SRB4 | SRB5 | MED7 | DNA-directed RNA polymerase II complex
Additional Lit For
RPO21 | MED2 | SOH1 | MED8 | MED1 | MED4 | MED11 | GAL11

Interaction Annotations


Genetic Interactions

Increase the total number of rows showing on this page by using the pull-down located below the table, or use the page scroll at the table's top right to browse through the table's pages; use the arrows to the right of a column header to sort by that column; filter the table using the "Filter" box at the top of the table; click on the small "i" buttons located within a cell for an annotation to view further details about experiment type and any other genes involved in the interaction.

Interactor Interactor Allele Assay Annotation Action Phenotype SGA score P-value Source Reference

Physical Interactions 22 entries for 10 genes

Increase the total number of rows showing on this page by using the pull-down located below the table, or use the page scroll at the table's top right to browse through the table's pages; use the arrows to the right of a column header to sort by that column; filter the table using the "Filter" box at the top of the table; click on the small "i" buttons located within a cell for an annotation to view further details about experiment type and any other genes involved in the interaction.

InteractorInteractorAssayAnnotationActionModification
GAL11MED7Affinity Capture-Westernmanually curatedHit-BaitNo Modification
MED11MED7Affinity Capture-Westernmanually curatedHit-BaitNo Modification
MED2MED7Affinity Capture-Westernmanually curatedHit-BaitNo Modification
MED2SRB5Affinity Capture-Westernmanually curatedHit-BaitNo Modification
MED2SOH1Affinity Capture-Westernmanually curatedHit-BaitNo Modification
MED7MED1Affinity Capture-Westernmanually curatedBait-HitNo Modification
MED7MED4Affinity Capture-Westernmanually curatedBait-HitNo Modification
MED8MED7Affinity Capture-Westernmanually curatedHit-BaitNo Modification
MED8SRB5Affinity Capture-Westernmanually curatedHit-BaitNo Modification
MED8SOH1Affinity Capture-Westernmanually curatedHit-BaitNo Modification
Showing 1 to 10 of 22 entries