Reference: Rubilar JC, et al. (2025) Genomic variation in Saccharomyces cerevisiae influences paraquat response through differential oxidative stress and vacuolar adaptations. Ecotoxicol Environ Saf 307:119426

Reference Help

Abstract


The conserved genetics between Saccharomyces cerevisiae and mammals makes yeast an ideal model for studying the biological effects of paraquat (PQ), an herbicide linked to Parkinson's disease (PD) risk in humans. To determine how genetic background influences PQ toxicity, we treated four diverse yeast strains (NA, SA, WA, and WE) and assessed their physiological (growth curves), molecular (superoxide and peroxide levels), and cellular (vacuolar morphology/disaggregation) responses. PQ significantly reduced the specific growth rate (µMax) in WE and WA strains, while SA and NA remained unaffected. Superoxide and peroxide levels increased across all strains to varying degrees, with SA and WE exhibiting the highest accumulation. Furthermore, we found an inverse association between superoxide levels and µMax. PQ also induced strain-dependent vacuolar morphology shifts, from a single large organelle to fragmented vacuoles, with the susceptible WE strain displaying the most extreme disaggregation. Given the known link between lysosomal dysfunction and pesticide-induced PD, we investigated correlations between predicted missense variants in vacuolar genes and PQ responses. This analysis identified associations between fen2 variants, the human SLC17A5 ortholog, and vacuolar disaggregation. Validation using a fen2-deleted strain (Δfen2) confirmed its mechanistic role, showing increased vacuolar fragmentation, elevated oxidative markers, and compromised growth upon PQ exposure. In conclusion, our findings demonstrate that PQ susceptibility is intrinsically linked to intracellular superoxide levels and that fen2 plays a critical role in the vacuolar adaptive response to oxidative stress. The mechanisms employed by the most resistant strains may inform the development of novel therapeutics for PQ-exposed individuals.

Reference Type
Journal Article
Authors
Rubilar JC, Szenfeld B, Cubillos FA, Klein AD
Primary Lit For
Additional Lit For
Review For

Gene Ontology Annotations


Increase the total number of rows showing on this page using the pull-down located below the table, or use the page scroll at the table's top right to browse through the table's pages; use the arrows to the right of a column header to sort by that column; filter the table using the "Filter" box at the top of the table.

Gene/Complex Qualifier Gene Ontology Term Aspect Annotation Extension Evidence Method Source Assigned On Reference

Phenotype Annotations


Increase the total number of rows showing on this page using the pull-down located below the table, or use the page scroll at the table's top right to browse through the table's pages; use the arrows to the right of a column header to sort by that column; filter the table using the "Filter" box at the top of the table; click on the small "i" buttons located within a cell for an annotation to view further details.

Gene Phenotype Experiment Type Mutant Information Strain Background Chemical Details Reference

Disease Annotations


Increase the total number of rows showing on this page using the pull-down located below the table, or use the page scroll at the table's top right to browse through the table's pages; use the arrows to the right of a column header to sort by that column; filter the table using the "Filter" box at the top of the table.

Gene Disease Ontology Term Qualifier Evidence Method Source Assigned On Reference

Regulation Annotations


Increase the total number of rows displayed on this page using the pull-down located below the table, or use the page scroll at the table's top right to browse through the table's pages; use the arrows to the right of a column header to sort by that column; to filter the table by a specific experiment type, type a keyword into the Filter box (for example, “microarray”); download this table as a .txt file using the Download button or click Analyze to further view and analyze the list of target genes using GO Term Finder, GO Slim Mapper, or SPELL.

Regulator Target Direction Regulation Of Happens During Method Evidence

Post-translational Modifications


Increase the total number of rows showing on this page by using the pull-down located below the table, or use the page scroll at the table's top right to browse through its pages; use the arrows to the right of a column header to sort by that column; filter the table using the "Filter" box at the top of the table.

Site Modification Modifier Reference

Interaction Annotations


Genetic Interactions

Increase the total number of rows showing on this page by using the pull-down located below the table, or use the page scroll at the table's top right to browse through the table's pages; use the arrows to the right of a column header to sort by that column; filter the table using the "Filter" box at the top of the table; click on the small "i" buttons located within a cell for an annotation to view further details about experiment type and any other genes involved in the interaction.

Interactor Interactor Allele Assay Annotation Action Phenotype SGA score P-value Source Reference

Physical Interactions

Increase the total number of rows showing on this page by using the pull-down located below the table, or use the page scroll at the table's top right to browse through the table's pages; use the arrows to the right of a column header to sort by that column; filter the table using the "Filter" box at the top of the table; click on the small "i" buttons located within a cell for an annotation to view further details about experiment type and any other genes involved in the interaction.

Interactor Interactor Assay Annotation Action Modification Source Reference

Functional Complementation Annotations


Increase the total number of rows showing on this page by using the pull-down located below the table, or use the page scroll at the table's top right to browse through its pages; use the arrows to the right of a column header to sort by that column; filter the table using the "Filter" box at the top of the table.

Gene Species Gene ID Strain background Direction Details Source Reference