Phenotype annotations for a gene are curated single mutant phenotypes that require an observable (e.g., "cell shape"), a qualifier (e.g., "abnormal"), a mutant type (e.g., null), strain background, and a reference. In addition, annotations are classified as classical genetics or high-throughput (e.g., large scale survey, systematic mutation set). Whenever possible, allele information and additional details are provided.
23 entries for 18 phenotypesIncrease the total number of rows showing on this page using the pull-down located below the table, or use the page scroll at the table's top right to browse through the table's pages; use the arrows to the right of a column header to sort by that column; filter the table using the "Filter" box at the top of the table; click on the small "i" buttons located within a cell for an annotation to view further details.
| Gene | Phenotype | Experiment Type | Mutant Information | Strain Background | Chemical | Details | Reference |
|---|---|---|---|---|---|---|---|
| BAR1 | bud morphology: abnormal | systematic mutation set | null Allele: bar1-Δ | S288C | Details: bud is abnormally elongated | Watanabe M, et al. (2009) PMID:19466415 | |
| BAR1 | competitive fitness: decreased | competitive growth fitness profiling using complete deletion alleles | null Allele: bar1-Δ | S288C | Media: minimal medium Details: Relative fitness score: 0.966 | Breslow DK, et al. (2008) PMID:18622397 | |
| BAR1 | competitive fitness: increased | systematic mutation set | null Allele: bar1-Δ | S288C | ethanol | Qian W, et al. (2012) PMID:23103169 | |
| BAR1 | competitive fitness: increased | systematic mutation set | null Allele: bar1-Δ | S288C | Media: glycerol medium, YPG | Qian W, et al. (2012) PMID:23103169 | |
| BAR1 | competitive fitness: increased | systematic mutation set | null Allele: bar1-Δ | S288C | Media: rich medium (YPD) w/6% ethanol, ETH | Qian W, et al. (2012) PMID:23103169 | |
| BAR1 | competitive fitness: increased | systematic mutation set | null Allele: bar1-Δ | S288C | Media: synthetic complete medium, SC | Qian W, et al. (2012) PMID:23103169 | |
| BAR1 | competitive fitness: increased | systematic mutation set | null Allele: bar1-Δ | S288C | Media: synthetic oak exudate medium, OAK | Qian W, et al. (2012) PMID:23103169 | |
| BAR1 | endocytosis: decreased Reporter: Mup1-pHluorin | systematic mutation set | null Allele: bar1-Δ | S288C | Media: nitrogen starvation Details: class 1 mutant specifically defective in starvation-induced internalization of Mup1p with fluorescence remaining at the plasma membrane; not required for methionine-induced endocytosis | Ivashov V, et al. (2020) PMID:32744498 | |
| BAR1 | haploproficient | heterozygous diploid, competitive growth genome-wide fitness profiling | null Allele: bar1-Δ | S288C | Media: turbidostat growth in FPM medium Details: Relative growth score: 0.003 | Pir P, et al. (2012) PMID:22244311 | |
| BAR1 | hyperosmotic stress resistance: decreased | systematic mutation set | null Allele: bar1-Δ | S288C | 1 M sodium chloride | Yoshikawa K, et al. (2009) PMID:19054128 |
An interaction is defined as an experimentally observed physical or genetic interaction between two genes. There may be more than one row listed for the same interactor if the interaction between it and the given gene was observed in separate studies. All interactions listed in SGD are curated by BioGRID.
Increase the total number of rows showing on this page by using the pull-down located below the table, or use the page scroll at the table's top right to browse through the table's pages; use the arrows to the right of a column header to sort by that column; filter the table using the "Filter" box at the top of the table; click on the small "i" buttons located within a cell for an annotation to view further details about experiment type and any other genes involved in the interaction.
| Evidence ID | Analyze ID | Interactor | Interactor Systematic Name | Interactor | Interactor Systematic Name | Allele | Assay | Annotation | Action | Phenotype | SGA score | P-value | Source | Reference | Note |
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This diagram displays up to the top 30 positive interactions (green), negative interactions (orange), and phenotypes (blue) that are shared between the given allele (black) and other alleles (purple). The shared interactions or phenotypes can be visualized separately using the radio button at the bottom of the graph.
Addgene Plasmids | DNASU Plasmids | PlasmID | Thermo Scientific | YGRC
dHITS | FitDB | HIPHOP Chemogenomics | HIP HOP Profiles | MetaboGeneCard | PROPHECY | SCMD | ScreenTroll | TheCellVision | Yeast Phenome
BioGRID | CYC2008 | GeneMANIA | IMP | InterologFinder | ModelArchive | TheCellMap