Teyssonnière EM, et al. (2024) Species-wide quantitative transcriptomes and proteomes reveal distinct genetic control of gene expression variation in yeast. Proc Natl Acad Sci U S A 121(19):e2319211121 PMID:38696467
Ensinck I, et al. (2023) The yeast RNA methylation complex consists of conserved yet reconfigured components with m6A-dependent and independent roles. Elife 12 PMID:37490041
Kamrad S, et al. (2023) Metabolic heterogeneity and cross-feeding within isogenic yeast populations captured by DILAC. Nat Microbiol 8(3):441-454 PMID:36797484
Varier RA, et al. (2022)N6-methyladenosine (m6A) reader Pho92 is recruited co-transcriptionally and couples translation to mRNA decay to promote meiotic fitness in yeast. Elife 11 PMID:36422864
Yu JSL, et al. (2022) Microbial communities form rich extracellular metabolomes that foster metabolic interactions and promote drug tolerance. Nat Microbiol 7(4):542-555 PMID:35314781
Yu JSL, et al. (2022) Inorganic sulfur fixation via a new homocysteine synthase allows yeast cells to cooperatively compensate for methionine auxotrophy. PLoS Biol 20(12):e3001912 PMID:36455053
Li J, et al. (2020) Slow Growth and Increased Spontaneous Mutation Frequency in Respiratory Deficient afo1- Yeast Suppressed by a Dominant Mutation in ATP3. G3 (Bethesda) 10(12):4637-4648 PMID:33093184
Li J, et al. (2020) Slow Growth and Increased Spontaneous Mutation Frequency in Respiratory Deficient afo1- Yeast Suppressed by a Dominant Mutation in ATP3. G3 (Bethesda) 10(12):4637-4648 PMID:33093184
Campbell K, et al. (2019) Self-Establishing Communities: A Yeast Model to Study the Physiological Impact of Metabolic Cooperation in Eukaryotic Cells. Methods Mol Biol 2049:263-282 PMID:31602617
Olin-Sandoval V, et al. (2019) Lysine harvesting is an antioxidant strategy and triggers underground polyamine metabolism. Nature 572(7768):249-253 PMID:31367038
Vowinckel J, et al. (2018) Cost-effective generation of precise label-free quantitative proteomes in high-throughput by microLC and data-independent acquisition. Sci Rep 8(1):4346 PMID:29531254
Zelezniak A, et al. (2018) Machine Learning Predicts the Yeast Metabolome from the Quantitative Proteome of Kinase Knockouts. Cell Syst 7(3):269-283.e6 PMID:30195436
Mülleder M, et al. (2017) A High-Throughput Method for the Quantitative Determination of Free Amino Acids in Saccharomyces cerevisiae by Hydrophilic Interaction Chromatography-Tandem Mass Spectrometry. Cold Spring Harb Protoc 2017(9):pdb.prot089094 PMID:28864565
Ponomarova O, et al. (2017) Yeast Creates a Niche for Symbiotic Lactic Acid Bacteria through Nitrogen Overflow. Cell Syst 5(4):345-357.e6 PMID:28964698
Campbell K, et al. (2016) Cell-to-cell heterogeneity emerges as consequence of metabolic cooperation in a synthetic yeast community. Biotechnol J 11(9):1169-78 PMID:27312776
Mülleder M, et al. (2016)Saccharomyces cerevisiae single-copy plasmids for auxotrophy compensation, multiple marker selection, and for designing metabolically cooperating communities. F1000Res 5:2351 PMID:27830062
Michel S, et al. (2015) A haploproficient interaction of the transaldolase paralogue NQM1 with the transcription factor VHR1 affects stationary phase survival and oxidative stress resistance. BMC Genet 16:13 PMID:25887987
Timm KN, et al. (2015) Hyperpolarized [U-(2) H, U-(13) C]Glucose reports on glycolytic and pentose phosphate pathway activity in EL4 tumors and glycolytic activity in yeast cells. Magn Reson Med 74(6):1543-7 PMID:25522215
Vowinckel J, et al. (2015) MitoLoc: A method for the simultaneous quantification of mitochondrial network morphology and membrane potential in single cells. Mitochondrion 24:77-86 PMID:26184437
Grüning NM, et al. (2014) Inhibition of triosephosphate isomerase by phosphoenolpyruvate in the feedback-regulation of glycolysis. Open Biol 4(3):130232 PMID:24598263
Krüger A, et al. (2013) Tpo1-mediated spermine and spermidine export controls cell cycle delay and times antioxidant protein expression during the oxidative stress response. EMBO Rep 14(12):1113-9 PMID:24136413
Mülleder M, et al. (2012) A prototrophic deletion mutant collection for yeast metabolomics and systems biology. Nat Biotechnol 30(12):1176-8 PMID:23222782
Ralser M, et al. (2012) The Saccharomyces cerevisiae W303-K6001 cross-platform genome sequence: insights into ancestry and physiology of a laboratory mutt. Open Biol 2(8):120093 PMID:22977733
Ralser M, et al. (2012) The Saccharomyces cerevisiae W303-K6001 cross-platform genome sequence: insights into ancestry and physiology of a laboratory mutt. Open Biol 2(8):120093 PMID:22977733
Tosato V, et al. (2012) Warburg effect and translocation-induced genomic instability: two yeast models for cancer cells. Front Oncol 2:212 PMID:23346549
Bluemlein K and Ralser M (2011) Monitoring protein expression in whole-cell extracts by targeted label- and standard-free LC-MS/MS. Nat Protoc 6(6):859-69 PMID:21637204
Krüger A, et al. (2011) The pentose phosphate pathway is a metabolic redox sensor and regulates transcription during the antioxidant response. Antioxid Redox Signal 15(2):311-24 PMID:21348809
Timmermann B, et al. (2010) A new dominant peroxiredoxin allele identified by whole-genome re-sequencing of random mutagenized yeast causes oxidant-resistance and premature aging. Aging (Albany NY) 2(8):475-86 PMID:20729566
Postma L, et al. (2009) Surviving in the cold: yeast mutants with extended hibernating lifespan are oxidant sensitive. Aging (Albany NY) 1(11):957-60 PMID:20157578
Ralser M, et al. (2009) Metabolic reconfiguration precedes transcriptional regulation in the antioxidant response. Nat Biotechnol 27(7):604-5 PMID:19587661
Ralser M, et al. (2009) Interfering with glycolysis causes Sir2-dependent hyper-recombination of Saccharomyces cerevisiae plasmids. PLoS One 4(4):e5376 PMID:19390637
Ralser M, et al. (2008) A catabolic block does not sufficiently explain how 2-deoxy-D-glucose inhibits cell growth. Proc Natl Acad Sci U S A 105(46):17807-11 PMID:19004802
Ralser M, et al. (2005) Ataxin-2 and huntingtin interact with endophilin-A complexes to function in plastin-associated pathways. Hum Mol Genet 14(19):2893-909 PMID:16115810
Ralser M, et al. (2005) Generation of a yeast two-hybrid strain suitable for competitive protein binding analysis. Biotechniques 39(2):165-6, 168 PMID:16116786