PXP1 / YEL020C Homology


Standard Name
PXP1 1
Systematic Name
YEL020C
SGD ID
SGD:S000000746
Feature Type
ORF , Verified
Description
Peroxisomal matrix protein; well-conserved in fungi; contains tripartite homology domain of thiamine pyrophosphate (TPP) enzymes; targeted to peroxisomes by Pex5p; contains low sequence identity with Pdc1p; mRNA identified as translated by ribosome profiling data 1 2 3 4
Name Description
PeroXisomal Protein 1
Comparative Info

Homologs

Homology calls are sourced from the Alliance of Genome Resources. Many aspects of data integration presented at the Alliance require a common set of orthology relationships among genes for the organisms represented, including human. The Alliance provides the results of all methods that have been benchmarked by the Quest for Orthologs Consortium (QfO). The homolog inferences from the different methods have been integrated using the DRSC Integrative Ortholog Prediction Tool (DIOPT), which integrates a number of existing methods including those used by the Alliance: Ensembl Compara, HGNC, Hieranoid, InParanoid, OMA, OrthoFinder, OrthoInspector, PANTHER, PhylomeDB, Roundup, TreeFam, and ZFIN.

7 entries for 7 homologs


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SpeciesGene IDGene nameSource
Caenorhabditis elegansWB:WBGene00007143hacl-1Alliance
Danio rerioZFIN:ZDB-GENE-040426-2058hacl1Alliance
Drosophila melanogasterFB:FBgn0034488HaclAlliance
Homo sapiensHGNC:17856HACL1Alliance
Mus musculusMGI:1929657Hacl1Alliance
Rattus norvegicusRGD:619849Hacl1Alliance
Xenopus tropicalisXenbase:XB-GENE-982243hacl1Alliance
Showing 1 to 7 of 7 entries

Functional Complementation

Information about cross-species functional complementation between yeast and other species, curated by SGD and the Princeton Protein Orthology Database (P-POD).

0 entries for 0 complements


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SpeciesGene IDStrain backgroundDirectionDetailsSourceReference
No complement data for PXP1
Showing 0 to 0 of 0 entries

Fungal Homologs

Fungal Homology calls are sourced from AllianceMine, which compiles fungal homology calls from FungiDB, CGD, Panther, PomBase, TreeFam, HomoloGene, and SGD.

28 entries for 28 homologs


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SpeciesGene IDGene nameDescriptionSource
A. flavus NRRL3357AFLA_000930FungiDB
A. flavus NRRL3357AFLA_032500FungiDB
A. flavus NRRL3357AFLA_058050FungiDB
A. flavus NRRL3357AFLA_058210FungiDB
A. flavus NRRL3357AFLA_078740FungiDB
A. niger ATCC 1015ASPNIDRAFT_210558FungiDB
A. niger ATCC 1015ASPNIDRAFT_35805FungiDB
A. niger ATCC 1015ASPNIDRAFT_51385FungiDB
C. gattii WM276CGB_B2830WFungiDB
C. immitis H538.4CIHG_02014FungiDB
Showing 1 to 10 of 28 entries

External Identifiers

List of external identifiers for the protein from various database sources.

16 entries for 9 sources


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External IDSource
5281DIP
4.1.2.63ExPASy
6320816GenBank/EMBL/DDBJ
AAB64497.1GenBank/EMBL/DDBJ
731407GenBank/EMBL/DDBJ
602387GenBank/EMBL/DDBJ
U18530GenBank/EMBL/DDBJ
5711LoQAtE
NM_001178835.1NCBI
856694NCBI
Showing 1 to 10 of 16 entries

Resources