RPL42B / YHR141C Homology


Standard Name
RPL42B
Systematic Name
YHR141C
SGD ID
SGD:S000001183
Aliases
L41B 2 , L42B 2 , MAK18 , YL27 2 , YP44 2 , L44e 5 , eL42 17
Feature Type
ORF , Verified
Description
Ribosomal 60S subunit protein L42B; required for propagation of the killer toxin-encoding M1 double-stranded RNA satellite of the L-A double-stranded RNA virus; homologous to mammalian ribosomal protein L36A, no bacterial homolog; RPL42B has a paralog, RPL42A, that arose from the whole genome duplication 1 2 3 4 5
Name Description
Ribosomal Protein of the Large subunit
Paralog
RPL42A 4
Comparative Info

Homologs

Homology calls are sourced from the Alliance of Genome Resources. Many aspects of data integration presented at the Alliance require a common set of orthology relationships among genes for the organisms represented, including human. The Alliance provides the results of all methods that have been benchmarked by the Quest for Orthologs Consortium (QfO). The homolog inferences from the different methods have been integrated using the DRSC Integrative Ortholog Prediction Tool (DIOPT), which integrates a number of existing methods including those used by the Alliance: Ensembl Compara, HGNC, Hieranoid, InParanoid, OMA, OrthoFinder, OrthoInspector, PANTHER, PhylomeDB, Roundup, TreeFam, and ZFIN.

15 entries for 15 homologs


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SpeciesGene IDGene nameSource
Caenorhabditis elegansWB:WBGene00004454rpl-36AAlliance
Danio rerioZFIN:ZDB-GENE-020423-1rpl36aAlliance
Drosophila melanogasterFB:FBgn0031980RpL36AAlliance
Homo sapiensHGNC:10346RPL36ALAlliance
Homo sapiensHGNC:10359RPL36AAlliance
Mus musculusMGI:3648757Gm6525Alliance
Mus musculusMGI:1913733Rpl36alAlliance
Mus musculusMGI:3642585Rpl36a-ps1Alliance
Mus musculusMGI:1201789Rpl36aAlliance
Rattus norvegicusRGD:1564617Rpl36Al2Alliance
Showing 1 to 10 of 15 entries

Functional Complementation

Information about cross-species functional complementation between yeast and other species, curated by SGD and the Princeton Protein Orthology Database (P-POD).

0 entries for 0 complements


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SpeciesGene IDStrain backgroundDirectionDetailsSourceReference
No complement data for RPL42B
Showing 0 to 0 of 0 entries

Fungal Homologs

Fungal Homology calls are sourced from AllianceMine, which compiles fungal homology calls from FungiDB, CGD, Panther, PomBase, TreeFam, HomoloGene, and SGD.


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Species Gene ID Gene name Description Source

External Identifiers

List of external identifiers for the protein from various database sources.

21 entries for 7 sources


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External IDSource
AN6181AspGD
6681849GenBank/EMBL/DDBJ
AAB68420.1GenBank/EMBL/DDBJ
BAA01436.1GenBank/EMBL/DDBJ
6321934GenBank/EMBL/DDBJ
U10398GenBank/EMBL/DDBJ
338819339GenBank/EMBL/DDBJ
D10579GenBank/EMBL/DDBJ
500688GenBank/EMBL/DDBJ
218484GenBank/EMBL/DDBJ
Showing 1 to 10 of 21 entries

Resources