Literature Help
BAT1 / YHR208W Literature
All manually curated literature for the specified gene, organized by relevance to the gene and by
association with specific annotations to the gene in SGD. SGD gathers references via a PubMed search for
papers whose titles or abstracts contain “yeast” or “cerevisiae;” these papers are reviewed manually and
linked to relevant genes and literature topics by SGD curators.
- Unique References
- 162
- Aliases
-
ECA39
2
,
TWT1
7
Primary Literature
Literature that either focuses on the gene or contains information about function, biological role,
cellular location, phenotype, regulation, structure, or disease homologs in other species for the gene
or gene product.
No primary literature curated.
Download References (.nbib)
- Blank HM, et al. (2023) Branched-chain amino acid synthesis is coupled to TOR activation early in the cell cycle in yeast. EMBO Rep 24(9):e57372 PMID:37497662
- Koonthongkaew J, et al. (2022) Improvement of Fusel Alcohol Production by Engineering of the Yeast Branched-Chain Amino Acid Aminotransaminase. Appl Environ Microbiol 88(13):e0055722 PMID:35699439
- Sing CN, et al. (2022) Identification of a modulator of the actin cytoskeleton, mitochondria, nutrient metabolism and lifespan in yeast. Nat Commun 13(1):2706 PMID:35577788
- Tate JJ, et al. (2022) Effects of abolishing Whi2 on the proteome and nitrogen catabolite repression-sensitive protein production. G3 (Bethesda) 12(3) PMID:35100365
- Hammer SK, et al. (2020) Mitochondrial Compartmentalization Confers Specificity to the 2-Ketoacid Recursive Pathway: Increasing Isopentanol Production in Saccharomyces cerevisiae. ACS Synth Biol 9(3):546-555 PMID:32049515
- Koonthongkaew J, et al. (2020) Effect of the Ala234Asp replacement in mitochondrial branched-chain amino acid aminotransferase on the production of BCAAs and fusel alcohols in yeast. Appl Microbiol Biotechnol 104(18):7915-7925 PMID:32776205
- Sieiro-Sampedro T, et al. (2020) The effect of two antifungal commercial formulations on the metabolism of a commercial Saccharomyces cerevisiae strain and their repercussion on fermentation evolution and phenylalanine catabolism. Food Microbiol 92:103554 PMID:32950148
- Antunes D, et al. (2019) Overexpression of branched-chain amino acid aminotransferases rescues the growth defects of cells lacking the Barth syndrome-related gene TAZ1. J Mol Med (Berl) 97(2):269-279 PMID:30604168
- Parapouli M, et al. (2019) Comparative transcriptional analysis of flavour-biosynthetic genes of a native Saccharomyces cerevisiae strain fermenting in its natural must environment, vs. a commercial strain and correlation of the genes' activities with the produced flavour compounds. J Biol Res (Thessalon) 26:5 PMID:31406688
- Lee KM, et al. (2018) Elimination of biosynthetic pathways for l-valine and l-isoleucine in mitochondria enhances isobutanol production in engineered Saccharomyces cerevisiae. Bioresour Technol 268:271-277 PMID:30081287
- Takpho N, et al. (2018) Valine biosynthesis in Saccharomyces cerevisiae is regulated by the mitochondrial branched-chain amino acid aminotransferase Bat1. Microb Cell 5(6):293-299 PMID:29850466
- González J, et al. (2017) Diversification of Transcriptional Regulation Determines Subfunctionalization of Paralogous Branched Chain Aminotransferases in the Yeast Saccharomyces cerevisiae. Genetics 207(3):975-991 PMID:28912343
- Hammer SK and Avalos JL (2017) Uncovering the role of branched-chain amino acid transaminases in Saccharomyces cerevisiae isobutanol biosynthesis. Metab Eng 44:302-312 PMID:29037781
- Shellhammer JP, et al. (2017) Amino acid metabolites that regulate G protein signaling during osmotic stress. PLoS Genet 13(5):e1006829 PMID:28558063
- Yu AQ, et al. (2016) Metabolic engineering of Saccharomyces cerevisiae for the overproduction of short branched-chain fatty acids. Metab Eng 34:36-43 PMID:26721212
- Kingsbury JM, et al. (2015) Branched-Chain Aminotransferases Control TORC1 Signaling in Saccharomyces cerevisiae. PLoS Genet 11(12):e1005714 PMID:26659116
- Zhang CY, et al. (2015) Decreased production of higher alcohols by Saccharomyces cerevisiae for Chinese rice wine fermentation by deletion of Bat aminotransferases. J Ind Microbiol Biotechnol 42(4):617-25 PMID:25616436
- Hu J, et al. (2014) Tor-Sch9 deficiency activates catabolism of the ketone body-like acetic acid to promote trehalose accumulation and longevity. Aging Cell 13(3):457-67 PMID:24649827
- Colón M, et al. (2011) Saccharomyces cerevisiae Bat1 and Bat2 aminotransferases have functionally diverged from the ancestral-like Kluyveromyces lactis orthologous enzyme. PLoS One 6(1):e16099 PMID:21267457
- Pirkov I, et al. (2008) A complete inventory of all enzymes in the eukaryotic methionine salvage pathway. FEBS J 275(16):4111-20 PMID:18625006
- Lilly M, et al. (2006) The effect of increased branched-chain amino acid transaminase activity in yeast on the production of higher alcohols and on the flavour profiles of wine and distillates. FEMS Yeast Res 6(5):726-43 PMID:16879424
- Schoondermark-Stolk SA, et al. (2005) Bat2p is essential in Saccharomyces cerevisiae for fusel alcohol production on the non-fermentable carbon source ethanol. FEMS Yeast Res 5(8):757-66 PMID:15851104
- Eden A, et al. (2001) Involvement of branched-chain amino acid aminotransferases in the production of fusel alcohols during fermentation in yeast. Appl Microbiol Biotechnol 55(3):296-300 PMID:11341309
- Dickinson JR, et al. (1998) An investigation of the metabolism of valine to isobutyl alcohol in Saccharomyces cerevisiae. J Biol Chem 273(40):25751-6 PMID:9748245
- Eden A and Benvenisty N (1998) Characterization of a branched-chain amino-acid aminotransferase from Schizosaccharomyces pombe. Yeast 14(2):189-94 PMID:9483807
- Kolaczkowski M, et al. (1998) In vivo characterization of the drug resistance profile of the major ABC transporters and other components of the yeast pleiotropic drug resistance network. Microb Drug Resist 4(3):143-58 PMID:9818966
- Eden A, et al. (1996) Two yeast homologs of ECA39, a target for c-Myc regulation, code for cytosolic and mitochondrial branched-chain amino acid aminotransferases. J Biol Chem 271(34):20242-5 PMID:8702755
- Kispal G, et al. (1996) Mitochondrial and cytosolic branched-chain amino acid transaminases from yeast, homologs of the myc oncogene-regulated Eca39 protein. J Biol Chem 271(40):24458-64 PMID:8798704
- Schuldiner O, et al. (1996) ECA39, a conserved gene regulated by c-Myc in mice, is involved in G1/S cell cycle regulation in yeast. Proc Natl Acad Sci U S A 93(14):7143-8 PMID:8692959
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Additional Literature
Papers that show experimental evidence for the gene or describe homologs in other species, but
for which the gene is not the paper’s principal focus.
No additional literature curated.
Download References (.nbib)
- Ali SA, et al. (2024) New regulatory role of Znf1 in transcriptional control of pentose phosphate pathway and ATP synthesis for enhanced isobutanol and acid tolerance. Yeast 41(6):401-417 PMID:38708451
- Su Y, et al. (2023) Transcriptomic changes in single yeast cells under various stress conditions. BMC Genomics 24(1):88 PMID:36829151
- Kong Y, et al. (2022) Epigenetic Changes in Saccharomyces cerevisiae Alters the Aromatic Profile in Alcoholic Fermentation. Appl Environ Microbiol 88(23):e0152822 PMID:36374027
- Arita Y, et al. (2021) A genome-scale yeast library with inducible expression of individual genes. Mol Syst Biol 17(6):e10207 PMID:34096681
- Lanz MC, et al. (2021) In-depth and 3-dimensional exploration of the budding yeast phosphoproteome. EMBO Rep 22(2):e51121 PMID:33491328
- Liu P, et al. (2021) Effect of Unsaturated Fatty Acids on Intra-Metabolites and Aroma Compounds of Saccharomyces cerevisiae in Wine Fermentation. Foods 10(2) PMID:33573124
- Pereira F, et al. (2021) Model-guided development of an evolutionarily stable yeast chassis. Mol Syst Biol 17(7):e10253 PMID:34292675
- Tian T, et al. (2020) Uncovering mechanisms of greengage wine fermentation against acidic stress via genomic, transcriptomic, and metabolic analyses of Saccharomyces cerevisiae. Appl Microbiol Biotechnol 104(17):7619-7629 PMID:32651599
- Lee JH, et al. (2019) The overexpression of cucumber (Cucumis sativus L.) genes that encode the branched-chain amino acid transferase modulate flowering time in Arabidopsis thaliana. Plant Cell Rep 38(1):25-35 PMID:30298307
- Lin X, et al. (2019) Evaluation of the volatile profile of wax apple (Syzygium samarangense) wines fermented with different commercial Saccharomyces cerevisiae strains. Food Sci Biotechnol 28(3):657-667 PMID:31093423
- Liu PT, et al. (2019) Comparing the Effects of Different Unsaturated Fatty Acids on Fermentation Performance of Saccharomyces cerevisiae and Aroma Compounds during Red Wine Fermentation. Molecules 24(3) PMID:30717212
- Park SH and Hahn JS (2019) Development of an efficient cytosolic isobutanol production pathway in Saccharomyces cerevisiae by optimizing copy numbers and expression of the pathway genes based on the toxic effect of α-acetolactate. Sci Rep 9(1):3996 PMID:30850698
- Tondini F, et al. (2019) Linking gene expression and oenological traits: Comparison between Torulaspora delbrueckii and Saccharomyces cerevisiae strains. Int J Food Microbiol 294:42-49 PMID:30763906
- Zhang Y, et al. (2019) Xylose utilization stimulates mitochondrial production of isobutanol and 2-methyl-1-butanol in Saccharomyces cerevisiae. Biotechnol Biofuels 12:223 PMID:31548865
- He Q, et al. (2018) Oleaginicity of the yeast strain Saccharomyces cerevisiae D5A. Biotechnol Biofuels 11:258 PMID:30258492
- Ma L, et al. (2017) Reduced Production of Higher Alcohols by Saccharomyces cerevisiae in Red Wine Fermentation by Simultaneously Overexpressing BAT1 and Deleting BAT2. J Agric Food Chem 65(32):6936-6942 PMID:28721728
- Grünberg S, et al. (2016) Mediator binding to UASs is broadly uncoupled from transcription and cooperative with TFIID recruitment to promoters. EMBO J 35(22):2435-2446 PMID:27797823
- Heldt FS, et al. (2015) Community control in cellular protein production: consequences for amino acid starvation. Philos Trans A Math Phys Eng Sci 373(2056) PMID:26527812
- Montalvo-Arredondo J, et al. (2015) Functional roles of a predicted branched chain aminotransferase encoded by the LkBAT1 gene of the yeast Lachancea kluyveri. Fungal Genet Biol 85:71-82 PMID:26563416
- Moreno-García J, et al. (2015) Proteins involved in wine aroma compounds metabolism by a Saccharomyces cerevisiae flor-velum yeast strain grown in two conditions. Food Microbiol 51:1-9 PMID:26187821
- Foster AW, et al. (2014) A chemical potentiator of copper-accumulation used to investigate the iron-regulons of Saccharomyces cerevisiae. Mol Microbiol 93(2):317-30 PMID:24895027
- Förster J, et al. (2014) A blueprint of the amino acid biosynthesis network of hemiascomycetes. FEMS Yeast Res 14(7):1090-100 PMID:25187056
- Park SH, et al. (2014) Metabolic engineering of Saccharomyces cerevisiae for the production of isobutanol and 3-methyl-1-butanol. Appl Microbiol Biotechnol 98(21):9139-47 PMID:25280745
- Renvoisé M, et al. (2014) Quantitative variations of the mitochondrial proteome and phosphoproteome during fermentative and respiratory growth in Saccharomyces cerevisiae. J Proteomics 106:140-50 PMID:24769239
- Picotti P, et al. (2013) A complete mass-spectrometric map of the yeast proteome applied to quantitative trait analysis. Nature 494(7436):266-70 PMID:23334424
- Austin RJ, et al. (2012) IQcat: multiplexed protein quantification by isoelectric QconCAT. Proteomics 12(13):2078-83 PMID:22623424
- Chubukov V, et al. (2012) Regulatory architecture determines optimal regulation of gene expression in metabolic pathways. Proc Natl Acad Sci U S A 109(13):5127-32 PMID:22416120
- Lei H, et al. (2012) Effects of wort gravity and nitrogen level on fermentation performance of brewer's yeast and the formation of flavor volatiles. Appl Biochem Biotechnol 166(6):1562-74 PMID:22281783
- Vizoso-Vázquez A, et al. (2012) Ixr1p and the control of the Saccharomyces cerevisiae hypoxic response. Appl Microbiol Biotechnol 94(1):173-84 PMID:22189861
- de Souza AP, et al. (2012) Strategies to select yeast starters cultures for production of flavor compounds in cachaça fermentations. Antonie Van Leeuwenhoek 101(2):379-92 PMID:21932076
- Hébert A, et al. (2011) Biodiversity in sulfur metabolism in hemiascomycetous yeasts. FEMS Yeast Res 11(4):366-78 PMID:21348937
- McDonagh B, et al. (2011) Biosynthetic and iron metabolism is regulated by thiol proteome changes dependent on glutaredoxin-2 and mitochondrial peroxiredoxin-1 in Saccharomyces cerevisiae. J Biol Chem 286(17):15565-76 PMID:21385868
- Parreiras LS, et al. (2011) Cellular effects and epistasis among three determinants of adaptation in experimental populations of Saccharomyces cerevisiae. Eukaryot Cell 10(10):1348-56 PMID:21856932
- Styger G, et al. (2011) Identifying genes that impact on aroma profiles produced by Saccharomyces cerevisiae and the production of higher alcohols. Appl Microbiol Biotechnol 91(3):713-30 PMID:21547456
- Marino SM, et al. (2010) Characterization of surface-exposed reactive cysteine residues in Saccharomyces cerevisiae. Biochemistry 49(35):7709-21 PMID:20698499
- Baerends RJ, et al. (2009) Impaired uptake and/or utilization of leucine by Saccharomyces cerevisiae is suppressed by the SPT15-300 allele of the TATA-binding protein gene. Appl Environ Microbiol 75(19):6055-61 PMID:19666729
- Helbig AO, et al. (2009) A three-way proteomics strategy allows differential analysis of yeast mitochondrial membrane protein complexes under anaerobic and aerobic conditions. Proteomics 9(20):4787-98 PMID:19750512
- Salazar M, et al. (2009) Uncovering transcriptional regulation of glycerol metabolism in Aspergilli through genome-wide gene expression data analysis. Mol Genet Genomics 282(6):571-86 PMID:19784673
- Szklarczyk R and Huynen MA (2009) Expansion of the human mitochondrial proteome by intra- and inter-compartmental protein duplication. Genome Biol 10(11):R135 PMID:19930686
- Woo DK, et al. (2009) Multiple pathways of mitochondrial-nuclear communication in yeast: intergenomic signaling involves ABF1 and affects a different set of genes than retrograde regulation. Biochim Biophys Acta 1789(2):135-45 PMID:18977319
- Conant GC and Wolfe KH (2008) Turning a hobby into a job: how duplicated genes find new functions. Nat Rev Genet 9(12):938-50 PMID:19015656
- Pham TK and Wright PC (2008) The proteomic response of Saccharomyces cerevisiae in very high glucose conditions with amino acid supplementation. J Proteome Res 7(11):4766-74 PMID:18808174
- Rossouw D, et al. (2008) Linking gene regulation and the exo-metabolome: a comparative transcriptomics approach to identify genes that impact on the production of volatile aroma compounds in yeast. BMC Genomics 9:530 PMID:18990252
- Saerens SM, et al. (2008) Monitoring the influence of high-gravity brewing and fermentation temperature on flavour formation by analysis of gene expression levels in brewing yeast. Appl Microbiol Biotechnol 80(6):1039-51 PMID:18751696
- Ulitsky I, et al. (2008) MetaReg: a platform for modeling, analysis and visualization of biological systems using large-scale experimental data. Genome Biol 9(1):R1 PMID:18171474
- Molina AM, et al. (2007) Influence of wine fermentation temperature on the synthesis of yeast-derived volatile aroma compounds. Appl Microbiol Biotechnol 77(3):675-87 PMID:17938912
- Rautio JJ, et al. (2007) Monitoring yeast physiology during very high gravity wort fermentations by frequent analysis of gene expression. Yeast 24(9):741-60 PMID:17605133
- Fry RC, et al. (2006) The DNA-damage signature in Saccharomyces cerevisiae is associated with single-strand breaks in DNA. BMC Genomics 7:313 PMID:17163986
- Mathy G, et al. (2006) Saccharomyces cerevisiae mitoproteome plasticity in response to recombinant alternative ubiquinol oxidase. J Proteome Res 5(2):339-48 PMID:16457600
- Oba T, et al. (2006) Properties of a trifluoroleucine-resistant mutant of Saccharomyces cerevisiae. Biosci Biotechnol Biochem 70(7):1776-9 PMID:16861814
- Onder O, et al. (2006) Modifications of the lipoamide-containing mitochondrial subproteome in a yeast mutant defective in cysteine desulfurase. Mol Cell Proteomics 5(8):1426-36 PMID:16684766
- Reinders J, et al. (2006) Toward the complete yeast mitochondrial proteome: multidimensional separation techniques for mitochondrial proteomics. J Proteome Res 5(7):1543-54 PMID:16823961
- Tagwerker C, et al. (2006) A tandem affinity tag for two-step purification under fully denaturing conditions: application in ubiquitin profiling and protein complex identification combined with in vivocross-linking. Mol Cell Proteomics 5(4):737-48 PMID:16432255
- Tang L, et al. (2006) Inferring direct regulatory targets from expression and genome location analyses: a comparison of transcription factor deletion and overexpression. BMC Genomics 7:215 PMID:16923194
- Boer VM, et al. (2005) Contribution of the Saccharomyces cerevisiae transcriptional regulator Leu3p to physiology and gene expression in nitrogen- and carbon-limited chemostat cultures. FEMS Yeast Res 5(10):885-97 PMID:15949974
- Barz T, et al. (2003) Genome-wide expression screens indicate a global role for protein kinase CK2 in chromatin remodeling. J Cell Sci 116(Pt 8):1563-77 PMID:12640040
- Rubin-Bejerano I, et al. (2003) Phagocytosis by neutrophils induces an amino acid deprivation response in Saccharomyces cerevisiae and Candida albicans. Proc Natl Acad Sci U S A 100(19):11007-12 PMID:12958213
- Sickmann A, et al. (2003) The proteome of Saccharomyces cerevisiae mitochondria. Proc Natl Acad Sci U S A 100(23):13207-12 PMID:14576278
- Kim JM, et al. (2001) A member of the YER057c/yjgf/Uk114 family links isoleucine biosynthesis and intact mitochondria maintenance in Saccharomyces cerevisiae. Genes Cells 6(6):507-17 PMID:11442631
- Klebl B, et al. (2001) A comprehensive analysis of gene expression profiles in a yeast N-glycosylation mutant. Biochem Biophys Res Commun 286(4):714-20 PMID:11520056
- Robertson LS, et al. (2000) The yeast A kinases differentially regulate iron uptake and respiratory function. Proc Natl Acad Sci U S A 97(11):5984-8 PMID:10811893
- Ben-Yosef T, et al. (1996) ECA39 is regulated by c-Myc in human and by a Jun/Fos homolog, Gcn4, in yeast. Oncogene 13(9):1859-66 PMID:8934531
- Hutson SM, et al. (1995) Cloning and expression of the mammalian cytosolic branched chain aminotransferase isoenzyme. J Biol Chem 270(51):30344-52 PMID:8530459
- Mehta PK, et al. (1993) Aminotransferases: demonstration of homology and division into evolutionary subgroups. Eur J Biochem 214(2):549-61 PMID:8513804
- Ryan ED, et al. (1973) Subcellular localization of the leucine biosynthetic enzymes in yeast. J Bacteriol 116(1):222-5 PMID:4355481
Reviews
No reviews curated.
Download References (.nbib)
- Yin MQ, et al. (2024) Metabolic engineering for compartmentalized biosynthesis of the valuable compounds in Saccharomyces cerevisiae. Microbiol Res 286:127815 PMID:38944943
- Fazio NA, et al. (2023) Inside Current Winemaking Challenges: Exploiting the Potential of Conventional and Unconventional Yeasts. Microorganisms 11(5) PMID:37317312
- Steyer JT and Todd RB (2023) Branched-chain amino acid biosynthesis in fungi. Essays Biochem 67(5):865-876 PMID:37455545
- Creamer DR, et al. (2022) Yeast Protein Kinase A Isoforms: A Means of Encoding Specificity in the Response to Diverse Stress Conditions? Biomolecules 12(7) PMID:35883514
- Romano P, et al. (2022) Role of Yeasts on the Sensory Component of Wines. Foods 11(13) PMID:35804735
- Lakshmi NM, et al. (2021) Microbial engineering for the production of isobutanol: current status and future directions. Bioengineered 12(2):12308-12321 PMID:34927549
- Toyokawa Y, et al. (2021) An overview of branched-chain amino acid aminotransferases: functional differences between mitochondrial and cytosolic isozymes in yeast and human. Appl Microbiol Biotechnol 105(21-22):8059-8072 PMID:34622336
- Tran HC and Van Aken O (2020) Mitochondrial unfolded protein-related responses across kingdoms: similar problems, different regulators. Mitochondrion 53:166-177 PMID:32502630
- Cordente AG, et al. (2019) Harnessing yeast metabolism of aromatic amino acids for fermented beverage bioflavouring and bioproduction. Appl Microbiol Biotechnol 103(11):4325-4336 PMID:31020380
- Escalera-Fanjul X, et al. (2019) Whole-Genome Duplication and Yeast's Fruitful Way of Life. Trends Genet 35(1):42-54 PMID:30366621
- Holt S, et al. (2019) The molecular biology of fruity and floral aromas in beer and other alcoholic beverages. FEMS Microbiol Rev 43(3):193-222 PMID:30445501
- Malina C, et al. (2018) Yeast mitochondria: an overview of mitochondrial biology and the potential of mitochondrial systems biology. FEMS Yeast Res 18(5) PMID:29788060
- Querol A, et al. (2018) New Trends in the Uses of Yeasts in Oenology. Adv Food Nutr Res 85:177-210 PMID:29860974
- Belda I, et al. (2017) Microbial Contribution to Wine Aroma and Its Intended Use for Wine Quality Improvement. Molecules 22(2) PMID:28125039
- Dzialo MC, et al. (2017) Physiology, ecology and industrial applications of aroma formation in yeast. FEMS Microbiol Rev 41(Supp_1):S95-S128 PMID:28830094
- Pires EJ, et al. (2014) Yeast: the soul of beer's aroma--a review of flavour-active esters and higher alcohols produced by the brewing yeast. Appl Microbiol Biotechnol 98(5):1937-49 PMID:24384752
- Cordente AG, et al. (2012) Flavour-active wine yeasts. Appl Microbiol Biotechnol 96(3):601-18 PMID:22940803
- González Siso MI, et al. (2012) The yeast hypoxic responses, resources for new biotechnological opportunities. Biotechnol Lett 34(12):2161-73 PMID:23007444
- Philpott CC, et al. (2012) Metabolic remodeling in iron-deficient fungi. Biochim Biophys Acta 1823(9):1509-20 PMID:22306284
- Paumi CM, et al. (2009) ABC transporters in Saccharomyces cerevisiae and their interactors: new technology advances the biology of the ABCC (MRP) subfamily. Microbiol Mol Biol Rev 73(4):577-93 PMID:19946134
- Hazelwood LA, et al. (2008) The Ehrlich pathway for fusel alcohol production: a century of research on Saccharomyces cerevisiae metabolism. Appl Environ Microbiol 74(8):2259-66 PMID:18281432
- Kobayashi M, et al. (2008) Beer volatile compounds and their application to low-malt beer fermentation. J Biosci Bioeng 106(4):317-23 PMID:19000606
- Swiegers JH and Pretorius IS (2005) Yeast modulation of wine flavor. Adv Appl Microbiol 57:131-75 PMID:16002012
- Kohlhaw GB (2003) Leucine biosynthesis in fungi: entering metabolism through the back door. Microbiol Mol Biol Rev 67(1):1-15, table of contents PMID:12626680
Gene Ontology Literature
Paper(s) associated with one or more GO (Gene Ontology) terms in SGD for the specified gene.
No gene ontology literature curated.
Download References (.nbib)
- Renvoisé M, et al. (2014) Quantitative variations of the mitochondrial proteome and phosphoproteome during fermentative and respiratory growth in Saccharomyces cerevisiae. J Proteomics 106:140-50 PMID:24769239
- Reinders J, et al. (2006) Toward the complete yeast mitochondrial proteome: multidimensional separation techniques for mitochondrial proteomics. J Proteome Res 5(7):1543-54 PMID:16823961
- Eden A, et al. (1996) Two yeast homologs of ECA39, a target for c-Myc regulation, code for cytosolic and mitochondrial branched-chain amino acid aminotransferases. J Biol Chem 271(34):20242-5 PMID:8702755
- Kispal G, et al. (1996) Mitochondrial and cytosolic branched-chain amino acid transaminases from yeast, homologs of the myc oncogene-regulated Eca39 protein. J Biol Chem 271(40):24458-64 PMID:8798704
Phenotype Literature
Paper(s) associated with one or more pieces of classical phenotype evidence in SGD for the specified gene.
No phenotype literature curated.
Download References (.nbib)
- Blank HM, et al. (2023) Branched-chain amino acid synthesis is coupled to TOR activation early in the cell cycle in yeast. EMBO Rep 24(9):e57372 PMID:37497662
- Sing CN, et al. (2022) Identification of a modulator of the actin cytoskeleton, mitochondria, nutrient metabolism and lifespan in yeast. Nat Commun 13(1):2706 PMID:35577788
- Koonthongkaew J, et al. (2020) Effect of the Ala234Asp replacement in mitochondrial branched-chain amino acid aminotransferase on the production of BCAAs and fusel alcohols in yeast. Appl Microbiol Biotechnol 104(18):7915-7925 PMID:32776205
- Eden A, et al. (2001) Involvement of branched-chain amino acid aminotransferases in the production of fusel alcohols during fermentation in yeast. Appl Microbiol Biotechnol 55(3):296-300 PMID:11341309
- Kispal G, et al. (1996) Mitochondrial and cytosolic branched-chain amino acid transaminases from yeast, homologs of the myc oncogene-regulated Eca39 protein. J Biol Chem 271(40):24458-64 PMID:8798704
- Schuldiner O, et al. (1996) ECA39, a conserved gene regulated by c-Myc in mice, is involved in G1/S cell cycle regulation in yeast. Proc Natl Acad Sci U S A 93(14):7143-8 PMID:8692959
Interaction Literature
Paper(s) associated with evidence supporting a physical or genetic interaction between the
specified gene and another gene in SGD. Currently, all interaction evidence is obtained from
BioGRID.
No interaction literature curated.
Download References (.nbib)
- Cruz VE, et al. (2024) The DEAD-box ATPase Dbp10/DDX54 initiates peptidyl transferase center formation during 60S ribosome biogenesis. Nat Commun 15(1):3296 PMID:38632236
- Filali-Mouncef Y, et al. (2024) An APEX2-based proximity-dependent biotinylation assay with temporal specificity to study protein interactions during autophagy in the yeast Saccharomyces cerevisiae. Autophagy 20(10):2323-2337 PMID:38958087
- Marmorale LJ, et al. (2024) Fast-evolving cofactors regulate the role of HEATR5 complexes in intra-Golgi trafficking. J Cell Biol 223(3) PMID:38240799
- O'Brien MJ and Ansari A (2024) Protein interaction network revealed by quantitative proteomic analysis links TFIIB to multiple aspects of the transcription cycle. Biochim Biophys Acta Proteins Proteom 1872(1):140968 PMID:37863410
- Choudhry SK, et al. (2023) Nuclear pore complexes mediate subtelomeric gene silencing by regulating PCNA levels on chromatin. J Cell Biol 222(9) PMID:37358474
- Krämer L, et al. (2023) MitoStores: chaperone-controlled protein granules store mitochondrial precursors in the cytosol. EMBO J 42(7):e112309 PMID:36704946
- Michaelis AC, et al. (2023) The social and structural architecture of the yeast protein interactome. Nature 624(7990):192-200 PMID:37968396
- Schuler MH, et al. (2021) Mitochondrial-derived compartments facilitate cellular adaptation to amino acid stress. Mol Cell 81(18):3786-3802.e13 PMID:34547239
- Schoppe J, et al. (2020) AP-3 vesicle uncoating occurs after HOPS-dependent vacuole tethering. EMBO J 39(20):e105117 PMID:32840906
- Antunes D, et al. (2019) Overexpression of branched-chain amino acid aminotransferases rescues the growth defects of cells lacking the Barth syndrome-related gene TAZ1. J Mol Med (Berl) 97(2):269-279 PMID:30604168
- MacGilvray ME, et al. (2018) Network inference reveals novel connections in pathways regulating growth and defense in the yeast salt response. PLoS Comput Biol 13(5):e1006088 PMID:29738528
- Hammer SK and Avalos JL (2017) Uncovering the role of branched-chain amino acid transaminases in Saccharomyces cerevisiae isobutanol biosynthesis. Metab Eng 44:302-312 PMID:29037781
- Jungfleisch J, et al. (2017) A novel translational control mechanism involving RNA structures within coding sequences. Genome Res 27(1):95-106 PMID:27821408
- Buser R, et al. (2016) The Replisome-Coupled E3 Ubiquitin Ligase Rtt101Mms22 Counteracts Mrc1 Function to Tolerate Genotoxic Stress. PLoS Genet 12(2):e1005843 PMID:26849847
- Costanzo M, et al. (2016) A global genetic interaction network maps a wiring diagram of cellular function. Science 353(6306) PMID:27708008
- Lakshminarasimhan M, et al. (2016) Proteomic and Genomic Analyses of the Rvb1 and Rvb2 Interaction Network upon Deletion of R2TP Complex Components. Mol Cell Proteomics 15(3):960-74 PMID:26831523
- Lorenzi I, et al. (2016) Ribosome-Associated Mba1 Escorts Cox2 from Insertion Machinery to Maturing Assembly Intermediates. Mol Cell Biol 36(22):2782-2793 PMID:27550809
- Yu AQ, et al. (2016) Metabolic engineering of Saccharomyces cerevisiae for the overproduction of short branched-chain fatty acids. Metab Eng 34:36-43 PMID:26721212
- Böttinger L, et al. (2015) Mitochondrial heat shock protein (Hsp) 70 and Hsp10 cooperate in the formation of Hsp60 complexes. J Biol Chem 290(18):11611-22 PMID:25792736
- Cary GA, et al. (2015) Proteomic Analysis of Dhh1 Complexes Reveals a Role for Hsp40 Chaperone Ydj1 in Yeast P-Body Assembly. G3 (Bethesda) 5(11):2497-511 PMID:26392412
- Kingsbury JM, et al. (2015) Branched-Chain Aminotransferases Control TORC1 Signaling in Saccharomyces cerevisiae. PLoS Genet 11(12):e1005714 PMID:26659116
- López G, et al. (2015) Diversification of Paralogous α-Isopropylmalate Synthases by Modulation of Feedback Control and Hetero-Oligomerization in Saccharomyces cerevisiae. Eukaryot Cell 14(6):564-77 PMID:25841022
- Porter DF, et al. (2015) Target selection by natural and redesigned PUF proteins. Proc Natl Acad Sci U S A 112(52):15868-73 PMID:26668354
- Usher J, et al. (2015) Utilising established SDL-screening methods as a tool for the functional genomic characterisation of model and non-model organisms. FEMS Yeast Res 15(8) PMID:26472754
- Zhang CY, et al. (2015) Decreased production of higher alcohols by Saccharomyces cerevisiae for Chinese rice wine fermentation by deletion of Bat aminotransferases. J Ind Microbiol Biotechnol 42(4):617-25 PMID:25616436
- Mehnert CS, et al. (2014) The mitochondrial ADP/ATP carrier associates with the inner membrane presequence translocase in a stoichiometric manner. J Biol Chem 289(39):27352-27362 PMID:25124039
- Park SH, et al. (2014) Metabolic engineering of Saccharomyces cerevisiae for the production of isobutanol and 3-methyl-1-butanol. Appl Microbiol Biotechnol 98(21):9139-47 PMID:25280745
- Mitchell SF, et al. (2013) Global analysis of yeast mRNPs. Nat Struct Mol Biol 20(1):127-33 PMID:23222640
- Willmund F, et al. (2013) The cotranslational function of ribosome-associated Hsp70 in eukaryotic protein homeostasis. Cell 152(1-2):196-209 PMID:23332755
- Aulds J, et al. (2012) Global identification of new substrates for the yeast endoribonuclease, RNase mitochondrial RNA processing (MRP). J Biol Chem 287(44):37089-97 PMID:22977255
- Costanzo M, et al. (2010) The genetic landscape of a cell. Science 327(5964):425-31 PMID:20093466
- Kaake RM, et al. (2010) Characterization of cell cycle specific protein interaction networks of the yeast 26S proteasome complex by the QTAX strategy. J Proteome Res 9(4):2016-29 PMID:20170199
- DeLuna A, et al. (2008) Exposing the fitness contribution of duplicated genes. Nat Genet 40(5):676-81 PMID:18408719
- Guerrero C, et al. (2008) Characterization of the proteasome interaction network using a QTAX-based tag-team strategy and protein interaction network analysis. Proc Natl Acad Sci U S A 105(36):13333-8 PMID:18757749
- Hasegawa Y, et al. (2008) Distinct roles for Khd1p in the localization and expression of bud-localized mRNAs in yeast. RNA 14(11):2333-47 PMID:18805955
- Pirkov I, et al. (2008) A complete inventory of all enzymes in the eukaryotic methionine salvage pathway. FEBS J 275(16):4111-20 PMID:18625006
- Gavin AC, et al. (2006) Proteome survey reveals modularity of the yeast cell machinery. Nature 440(7084):631-6 PMID:16429126
- Gavin AC, et al. (2002) Functional organization of the yeast proteome by systematic analysis of protein complexes. Nature 415(6868):141-7 PMID:11805826
- Ho Y, et al. (2002) Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Nature 415(6868):180-3 PMID:11805837
- Eden A, et al. (2001) Involvement of branched-chain amino acid aminotransferases in the production of fusel alcohols during fermentation in yeast. Appl Microbiol Biotechnol 55(3):296-300 PMID:11341309
Regulation Literature
Paper(s) associated with one or more pieces of regulation evidence in SGD, as found on the
Regulation page.
No regulation literature curated.
Post-translational Modifications Literature
Paper(s) associated with one or more pieces of post-translational modifications evidence in SGD.
No post-translational modifications literature curated.
Download References (.nbib)
- Frankovsky J, et al. (2021) The yeast mitochondrial succinylome: Implications for regulation of mitochondrial nucleoids. J Biol Chem 297(4):101155 PMID:34480900
- Lanz MC, et al. (2021) In-depth and 3-dimensional exploration of the budding yeast phosphoproteome. EMBO Rep 22(2):e51121 PMID:33491328
- Zhou X, et al. (2021) Cross-compartment signal propagation in the mitotic exit network. Elife 10 PMID:33481703
- Weinert BT, et al. (2013) Lysine succinylation is a frequently occurring modification in prokaryotes and eukaryotes and extensively overlaps with acetylation. Cell Rep 4(4):842-51 PMID:23954790
- Henriksen P, et al. (2012) Proteome-wide analysis of lysine acetylation suggests its broad regulatory scope in Saccharomyces cerevisiae. Mol Cell Proteomics 11(11):1510-22 PMID:22865919
- Albuquerque CP, et al. (2008) A multidimensional chromatography technology for in-depth phosphoproteome analysis. Mol Cell Proteomics 7(7):1389-96 PMID:18407956
High-Throughput Literature
Paper(s) associated with one or more pieces of high-throughput evidence in SGD.
No high-throughput literature curated.
Download References (.nbib)
- Coey CT and Clark DJ (2022) A systematic genome-wide account of binding sites for the model transcription factor Gcn4. Genome Res 32(2):367-377 PMID:34916251
- Rawal Y, et al. (2018) Gcn4 Binding in Coding Regions Can Activate Internal and Canonical 5' Promoters in Yeast. Mol Cell 70(2):297-311.e4 PMID:29628310
- Vizoso-Vázquez A, et al. (2012) Ixr1p and the control of the Saccharomyces cerevisiae hypoxic response. Appl Microbiol Biotechnol 94(1):173-84 PMID:22189861
- Uluisik I, et al. (2011) Boron stress activates the general amino acid control mechanism and inhibits protein synthesis. PLoS One 6(11):e27772 PMID:22114689
- Venters BJ, et al. (2011) A comprehensive genomic binding map of gene and chromatin regulatory proteins in Saccharomyces. Mol Cell 41(4):480-92 PMID:21329885
- Cipollina C, et al. (2008) Saccharomyces cerevisiae SFP1: at the crossroads of central metabolism and ribosome biogenesis. Microbiology (Reading) 154(Pt 6):1686-1699 PMID:18524923
- Hu Z, et al. (2007) Genetic reconstruction of a functional transcriptional regulatory network. Nat Genet 39(5):683-7 PMID:17417638
- Butcher RA, et al. (2006) Microarray-based method for monitoring yeast overexpression strains reveals small-molecule targets in TOR pathway. Nat Chem Biol 2(2):103-9 PMID:16415861