Phenotype Help

DOT1 / YDR440W Phenotype

Phenotype annotations for a gene are curated single mutant phenotypes that require an observable (e.g., "cell shape"), a qualifier (e.g., "abnormal"), a mutant type (e.g., null), strain background, and a reference. In addition, annotations are classified as classical genetics or high-throughput (e.g., large scale survey, systematic mutation set). Whenever possible, allele information and additional details are provided.


Summary
Non-essential gene; null mutant exhibits sensitivity to gamma rays but resistance to X rays and MMS; null mutant shows decreased silencing and has telomeres of heterogeneous length; overexpression also causes decreased silencing; in large-scale studies, null mutant has shortened chronological lifespan, increased resistance to heat, and altered resistance to various chemicals

Annotations

A phenotype is defined as an observable (e.g., apoptosis) and a qualifier (e.g., increased). There may be more than one row with the same phenotype if that phenotype was observed in separate studies or in different conditions, strains, alleles, etc.

39 entries for 22 phenotypes


Increase the total number of rows showing on this page using the pull-down located below the table, or use the page scroll at the table's top right to browse through the table's pages; use the arrows to the right of a column header to sort by that column; filter the table using the "Filter" box at the top of the table; click on the small "i" buttons located within a cell for an annotation to view further details.

PhenotypeExperiment TypeMutant InformationStrain BackgroundChemicalDetailsReference
chemical compound accumulation: increased
homozygous diploidnull
Allele: dot1-Δ
S288C0.1 mM potassium tellurite, tellurium atomOttosson LG, et al. (2010) PMID:20675578
chitin deposition: decreased
systematic mutation setnull
Allele: dot1-Δ
S288CDetails: Chitin level (nmole GlcNAc/mg dry weight): 13.2
Lesage G, et al. (2005) PMID:15715908
chronological lifespan: decreased
systematic mutation setnull
Allele: dot1-Δ
S288CMarek A and Korona R (2013) PMID:24151994
gamma ray resistance: decreased
classical geneticsnull
Allele: dot1-Δ
W303Wysocki R, et al. (2005) PMID:16166626
haploinsufficient
heterozygous diploid, competitive growth

genome-wide fitness profiling

null
Allele: dot1-Δ
S288CMedia: turbidostat growth in FPM medium
Details: Relative growth score: -0.0038
Pir P, et al. (2012) PMID:22244311
heat sensitivity: increased
systematic mutation setnull
Allele: dot1-Δ
S288CTemperature: elevated temperature, 39 °C
Details: weak heat-sensitivity; formation of smaller colonies than WT
Ruiz-Roig C, et al. (2010) PMID:20398213
mutation frequency: increased
classical geneticsnull
Allele: dot1-Δ
S288C0.005% methyl methanesulfonateDetails: 2-fold increased frequency of forward mutations at the CAN1 locus
Conde F and San-Segundo PA (2008) PMID:18562671
protein/peptide accumulation: decreased
Reporter: Rnr3p
systematic mutation setnull
Allele: dot1-Δ
S288C0.03% methyl methanesulfonateHendry JA, et al. (2015) PMID:25721128
protein/peptide distribution: increased
Reporter: Rad52-YFP

(Rad52-YFP foci formation)

classical geneticsnull
Allele: dot1-Δ
W3030.02% methyl methanesulfonateConde F and San-Segundo PA (2008) PMID:18562671
protein/peptide modification: increased
Reporter: histone H2A

S129

classical geneticsnull
Allele: dot1-Δ
W303Conde F and San-Segundo PA (2008) PMID:18562671
Showing 1 to 10 of 39 entries

Shared Phenotypes

This diagram displays phenotype observables (purple squares) that are shared between the given gene (yellow circle) and other genes (gray circles) based on the number of phenotype observables shared (adjustable using the slider at the bottom).


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Click on a gene or phenotype observable name to go to its specific page within SGD; drag any of the gene or observable objects around within the visualization for easier viewing; click “Reset” to automatically redraw the diagram; filter the genes that share observable terms with the given gene by the number of terms they share by clicking anywhere on the slider bar or dragging the tab to the desired filter number.


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