Literature Help
NCA3 / YJL116C Literature
All manually curated literature for the specified gene, organized by relevance to the gene and by
association with specific annotations to the gene in SGD. SGD gathers references via a PubMed search for
papers whose titles or abstracts contain “yeast” or “cerevisiae;” these papers are reviewed manually and
linked to relevant genes and literature topics by SGD curators.
Primary Literature
Literature that either focuses on the gene or contains information about function, biological role,
cellular location, phenotype, regulation, structure, or disease homologs in other species for the gene
or gene product.
No primary literature curated.
Download References (.nbib)
- Sanz AB, et al. (2022) Systematic Identification of Essential Genes Required for Yeast Cell Wall Integrity: Involvement of the RSC Remodelling Complex. J Fungi (Basel) 8(7) PMID:35887473
- Reynaud K, et al. (2021) Dynamic post-transcriptional regulation by Mrn1 links cell wall homeostasis to mitochondrial structure and function. PLoS Genet 17(4):e1009521 PMID:33857138
- Yofe I, et al. (2016) One library to make them all: streamlining the creation of yeast libraries via a SWAp-Tag strategy. Nat Methods 13(4):371-378 PMID:26928762
- Kuznetsov E, et al. (2013) SUN family proteins Sun4p, Uth1p and Sim1p are secreted from Saccharomyces cerevisiae and produced dependently on oxygen level. PLoS One 8(9):e73882 PMID:24040106
- Iwahashi Y, et al. (2006) Mechanisms of patulin toxicity under conditions that inhibit yeast growth. J Agric Food Chem 54(5):1936-42 PMID:16506856
- Camougrand NM, et al. (2000) The "SUN" family: UTH1, an ageing gene, is also involved in the regulation of mitochondria biogenesis in Saccharomyces cerevisiae. Arch Biochem Biophys 375(1):154-60 PMID:10683261
- Pélissier P, et al. (1995) NCA3, a nuclear gene involved in the mitochondrial expression of subunits 6 and 8 of the Fo-F1 ATP synthase of S. cerevisiae. Curr Genet 27(5):409-16 PMID:7586026
Related Literature
Genes that share literature (indicated by the purple circles) with the specified gene (indicated by yellow circle).
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Additional Literature
Papers that show experimental evidence for the gene or describe homologs in other species, but
for which the gene is not the paper’s principal focus.
No additional literature curated.
Download References (.nbib)
- Alvarado M, et al. (2024) The good, the bad, and the hazardous: comparative genomic analysis unveils cell wall features in the pathogen Candidozyma auris typical for both baker's yeast and Candida. FEMS Yeast Res 24 PMID:39656857
- Baek S, et al. (2021) The yeast platform engineered for synthetic gRNA-landing pads enables multiple gene integrations by a single gRNA/Cas9 system. Metab Eng 64:111-121 PMID:33549837
- Klim J, et al. (2020) Slow Adaptive Response of Budding Yeast Cells to Stable Conditions of Continuous Culture Can Occur without Genome Modifications. Genes (Basel) 11(12) PMID:33261040
- Laviña WA, et al. (2014) Suppression mechanism of the calcium sensitivity in Saccharomyces cerevisiae ptp2Δmsg5Δ double disruptant involves a novel HOG-independent function of Ssk2, transcription factor Msn2 and the protein kinase A component Bcy1. J Biosci Bioeng 117(2):135-141 PMID:23953972
- Tsanova B, et al. (2014) The RNA exosome affects iron response and sensitivity to oxidative stress. RNA 20(7):1057-67 PMID:24860016
- Atkinson GC, et al. (2012) Evolutionary and genetic analyses of mitochondrial translation initiation factors identify the missing mitochondrial IF3 in S. cerevisiae. Nucleic Acids Res 40(13):6122-34 PMID:22457064
- Reid RJ, et al. (2011) Selective ploidy ablation, a high-throughput plasmid transfer protocol, identifies new genes affecting topoisomerase I-induced DNA damage. Genome Res 21(3):477-86 PMID:21173034
- Tu WY, et al. (2011) Rpl12p affects the transcription of the PHO pathway high-affinity inorganic phosphate transporters and repressible phosphatases. Yeast 28(6):481-93 PMID:21469193
- Leadsham JE and Gourlay CW (2010) cAMP/PKA signaling balances respiratory activity with mitochondria dependent apoptosis via transcriptional regulation. BMC Cell Biol 11:92 PMID:21108829
- Papini M, et al. (2010) Phosphoglycerate mutase knock-out mutant Saccharomyces cerevisiae: physiological investigation and transcriptome analysis. Biotechnol J 5(10):1016-27 PMID:20815084
- He XJ, et al. (2009) Oxidative stress function of the Saccharomyces cerevisiae Skn7 receiver domain. Eukaryot Cell 8(5):768-78 PMID:19304952
- Shankarnarayan S, et al. (2008) Modulation of yeast Sln1 kinase activity by the CCW12 cell wall protein. J Biol Chem 283(4):1962-73 PMID:18048366
- Coronado JE, et al. (2007) Conserved processes and lineage-specific proteins in fungal cell wall evolution. Eukaryot Cell 6(12):2269-77 PMID:17951517
- Dardalhon M, et al. (2007) Specific transcriptional responses induced by 8-methoxypsoralen and UVA in yeast. FEMS Yeast Res 7(6):866-78 PMID:17608707
- Firon A, et al. (2007) The SUN41 and SUN42 genes are essential for cell separation in Candida albicans. Mol Microbiol 66(5):1256-75 PMID:18001349
- Jablonka W, et al. (2006) Deviation of carbohydrate metabolism by the SIT4 phosphatase in Saccharomyces cerevisiae. Biochim Biophys Acta 1760(8):1281-91 PMID:16764994
- Slattery MG, et al. (2006) The function and properties of the Azf1 transcriptional regulator change with growth conditions in Saccharomyces cerevisiae. Eukaryot Cell 5(2):313-20 PMID:16467472
- Titz B, et al. (2006) Transcriptional activators in yeast. Nucleic Acids Res 34(3):955-67 PMID:16464826
- Lahue E, et al. (2005) The Saccharomyces cerevisiae Sub2 protein suppresses heterochromatic silencing at telomeres and subtelomeric genes. Yeast 22(7):537-51 PMID:15942929
- Zhang Z and Kishino H (2004) Genomic background predicts the fate of duplicated genes: evidence from the yeast genome. Genetics 166(4):1995-9 PMID:15126414
- Sakaki K, et al. (2003) Response of genes associated with mitochondrial function to mild heat stress in yeast Saccharomyces cerevisiae. J Biochem 134(3):373-84 PMID:14561723
- Guyard C, et al. (2002) Characterization of a Williopsis saturnus var. mrakii high molecular weight secreted killer toxin with broad-spectrum antimicrobial activity. J Antimicrob Chemother 49(6):961-71 PMID:12039888
- Guyard C, et al. (2002) Cloning and characterization of WMSU1, a Williopsis saturnus var. mrakii gene encoding a new yeast SUN protein involved in the cell wall structure. Yeast 19(13):1127-38 PMID:12237854
- Velours G, et al. (2002) Dual cell wall/mitochondria localization of the 'SUN' family proteins. FEMS Microbiol Lett 207(2):165-72 PMID:11958935
- Mouassite M, et al. (2000) The 'SUN' family: yeast SUN4/SCW3 is involved in cell septation. Yeast 16(10):905-19 PMID:10870102
- Mouassite M, et al. (2000) The SUN family of Saccharomyces cerevisiae: the double knock-out of UTH1 and SIM1 promotes defects in nucleus migration and increased drug sensitivity. FEMS Microbiol Lett 182(1):137-41 PMID:10612745
- Ferea TL, et al. (1999) Systematic changes in gene expression patterns following adaptive evolution in yeast. Proc Natl Acad Sci U S A 96(17):9721-6 PMID:10449761
- Omi K, et al. (1999) Cloning and characterization of psu1(+), a new essential fission yeast gene involved in cell wall synthesis. Biochem Biophys Res Commun 262(2):368-74 PMID:10462482
- Holstege FC, et al. (1998) Dissecting the regulatory circuitry of a eukaryotic genome. Cell 95(5):717-28 PMID:9845373
- Cziepluch C, et al. (1996) Sequencing analysis of a 40.2 kb fragment of yeast chromosome X reveals 19 open reading frames including URA2 (5' end), TRK1, PBS2, SPT10, GCD14, RPE1, PHO86, NCA3, ASF1, CCT7, GZF3, two tRNA genes, three remnant delta elements and a Ty4 transposon. Yeast 12(14):1471-4 PMID:8948101
- Bergez P, et al. (1995) The sequence of a 44 420 bp fragment located on the left arm of chromosome XIV from Saccharomyces cerevisiae. Yeast 11(10):967-74 PMID:8533472
Reviews
No reviews curated.
Download References (.nbib)
- Golik P (2024) RNA processing and degradation mechanisms shaping the mitochondrial transcriptome of budding yeasts. IUBMB Life 76(1):38-52 PMID:37596708
- Barros MH and McStay GP (2020) Modular biogenesis of mitochondrial respiratory complexes. Mitochondrion 50:94-114 PMID:31669617
- Vieira Gomes AM, et al. (2018) Comparison of Yeasts as Hosts for Recombinant Protein Production. Microorganisms 6(2) PMID:29710826
- Hamann T (2015) The plant cell wall integrity maintenance mechanism-concepts for organization and mode of action. Plant Cell Physiol 56(2):215-23 PMID:25416836
- Song Y, et al. (2014) The different molecular mechanisms of mitophagy between yeast and mammals. Crit Rev Eukaryot Gene Expr 24(1):29-38 PMID:24579668
- Lipinski KA, et al. (2010) Maintenance and expression of the S. cerevisiae mitochondrial genome--from genetics to evolution and systems biology. Biochim Biophys Acta 1797(6-7):1086-98 PMID:20056105
- Rak M, et al. (2009) Assembly of F0 in Saccharomyces cerevisiae. Biochim Biophys Acta 1793(1):108-16 PMID:18672007
Gene Ontology Literature
Paper(s) associated with one or more GO (Gene Ontology) terms in SGD for the specified gene.
No gene ontology literature curated.
Download References (.nbib)
- Yofe I, et al. (2016) One library to make them all: streamlining the creation of yeast libraries via a SWAp-Tag strategy. Nat Methods 13(4):371-378 PMID:26928762
- Pélissier P, et al. (1995) NCA3, a nuclear gene involved in the mitochondrial expression of subunits 6 and 8 of the Fo-F1 ATP synthase of S. cerevisiae. Curr Genet 27(5):409-16 PMID:7586026
Interaction Literature
Paper(s) associated with evidence supporting a physical or genetic interaction between the
specified gene and another gene in SGD. Currently, all interaction evidence is obtained from
BioGRID.
No interaction literature curated.
Download References (.nbib)
- Bayne RA, et al. (2022) Yeast Ssd1 is a non-enzymatic member of the RNase II family with an alternative RNA recognition site. Nucleic Acids Res 50(5):2923-2937 PMID:34302485
- Chang Y, et al. (2021) Analysis of the TORC1 interactome reveals a spatially distinct function of TORC1 in mRNP complexes. J Cell Biol 220(4) PMID:33566094
- Corcoles-Saez I, et al. (2018) Essential Function of Mec1, the Budding Yeast ATM/ATR Checkpoint-Response Kinase, in Protein Homeostasis. Dev Cell 46(4):495-503.e2 PMID:30130531
- Opaliński Ł, et al. (2018) Recruitment of Cytosolic J-Proteins by TOM Receptors Promotes Mitochondrial Protein Biogenesis. Cell Rep 25(8):2036-2043.e5 PMID:30463002
- Lapointe CP, et al. (2017) Architecture and dynamics of overlapped RNA regulatory networks. RNA 23(11):1636-1647 PMID:28768715
- Costanzo M, et al. (2016) A global genetic interaction network maps a wiring diagram of cellular function. Science 353(6306) PMID:27708008
- Lapointe CP, et al. (2015) Protein-RNA networks revealed through covalent RNA marks. Nat Methods 12(12):1163-70 PMID:26524240
- Surma MA, et al. (2013) A lipid E-MAP identifies Ubx2 as a critical regulator of lipid saturation and lipid bilayer stress. Mol Cell 51(4):519-30 PMID:23891562
- Kaluarachchi Duffy S, et al. (2012) Exploring the yeast acetylome using functional genomics. Cell 149(4):936-48 PMID:22579291
- Costanzo M, et al. (2010) The genetic landscape of a cell. Science 327(5964):425-31 PMID:20093466
- Hasegawa Y, et al. (2008) Distinct roles for Khd1p in the localization and expression of bud-localized mRNAs in yeast. RNA 14(11):2333-47 PMID:18805955
- Camougrand NM, et al. (2000) The "SUN" family: UTH1, an ageing gene, is also involved in the regulation of mitochondria biogenesis in Saccharomyces cerevisiae. Arch Biochem Biophys 375(1):154-60 PMID:10683261
Regulation Literature
Paper(s) associated with one or more pieces of regulation evidence in SGD, as found on the
Regulation page.
No regulation literature curated.
Download References (.nbib)
- Reynaud K, et al. (2021) Dynamic post-transcriptional regulation by Mrn1 links cell wall homeostasis to mitochondrial structure and function. PLoS Genet 17(4):e1009521 PMID:33857138
- Song S, et al. (2020) Rap1-mediated nucleosome displacement can regulate gene expression in senescent cells without impacting the pace of senescence. Aging Cell 19(1):e13061 PMID:31742863
High-Throughput Literature
Paper(s) associated with one or more pieces of high-throughput evidence in SGD.
No high-throughput literature curated.
Download References (.nbib)
- Ellahi A, et al. (2015) The Chromatin and Transcriptional Landscape of Native Saccharomyces cerevisiae Telomeres and Subtelomeric Domains. Genetics 200(2):505-21 PMID:25823445
- Marek A and Korona R (2013) Restricted pleiotropy facilitates mutational erosion of major life-history traits. Evolution 67(11):3077-86 PMID:24151994
- Michaillat L and Mayer A (2013) Identification of genes affecting vacuole membrane fragmentation in Saccharomyces cerevisiae. PLoS One 8(2):e54160 PMID:23383298
- Teng X, et al. (2011) Gene-dependent cell death in yeast. Cell Death Dis 2(8):e188 PMID:21814286
- Breslow DK, et al. (2008) A comprehensive strategy enabling high-resolution functional analysis of the yeast genome. Nat Methods 5(8):711-8 PMID:18622397
- Cipollina C, et al. (2008) Saccharomyces cerevisiae SFP1: at the crossroads of central metabolism and ribosome biogenesis. Microbiology (Reading) 154(Pt 6):1686-1699 PMID:18524923
- Hu Z, et al. (2007) Genetic reconstruction of a functional transcriptional regulatory network. Nat Genet 39(5):683-7 PMID:17417638
- MacIsaac KD, et al. (2006) An improved map of conserved regulatory sites for Saccharomyces cerevisiae. BMC Bioinformatics 7:113 PMID:16522208
- Mendiratta G, et al. (2006) The DNA-binding domain of the yeast Spt10p activator includes a zinc finger that is homologous to foamy virus integrase. J Biol Chem 281(11):7040-8 PMID:16415340
- Sopko R, et al. (2006) Mapping pathways and phenotypes by systematic gene overexpression. Mol Cell 21(3):319-30 PMID:16455487
- Giaever G, et al. (2002) Functional profiling of the Saccharomyces cerevisiae genome. Nature 418(6896):387-91 PMID:12140549