RPL17B / YJL177W Homology


Standard Name
RPL17B
Systematic Name
YJL177W
SGD ID
SGD:S000003713
Aliases
L17B 1 , L20B 1 , YL17 1 , L22 4 , uL22 17
Feature Type
ORF , Verified
Description
Ribosomal 60S subunit protein L17B; required for processing of 27SB pre-rRNA and formation of stable 66S assembly intermediates; homologous to mammalian ribosomal protein L17 and bacterial L22; RPL17B has a paralog, RPL17A, that arose from the whole genome duplication 1 2 3 4 5
Name Description
Ribosomal Protein of the Large subunit
Paralog
RPL17A 3
Comparative Info

Homologs

Homology calls are sourced from the Alliance of Genome Resources. Many aspects of data integration presented at the Alliance require a common set of orthology relationships among genes for the organisms represented, including human. The Alliance provides the results of all methods that have been benchmarked by the Quest for Orthologs Consortium (QfO). The homolog inferences from the different methods have been integrated using the DRSC Integrative Ortholog Prediction Tool (DIOPT), which integrates a number of existing methods including those used by the Alliance: Ensembl Compara, HGNC, Hieranoid, InParanoid, OMA, OrthoFinder, OrthoInspector, PANTHER, PhylomeDB, Roundup, TreeFam, and ZFIN.

10 entries for 10 homologs


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SpeciesGene IDGene nameSource
Caenorhabditis elegansWB:WBGene00004429rpl-17Alliance
Danio rerioZFIN:ZDB-GENE-030131-8585rpl17Alliance
Drosophila melanogasterFB:FBgn0029897RpL17Alliance
Homo sapiensHGNC:10307RPL17Alliance
Mus musculusMGI:2448270Rpl17Alliance
Mus musculusMGI:3647029Gm6133Alliance
Rattus norvegicusRGD:1303019Rpl17Alliance
Rattus norvegicusRGD:1560017Rpl17-ps17Alliance
Rattus norvegicusRGD:1359290Rpl17-ps16Alliance
Xenopus tropicalisXenbase:XB-GENE-5859417rpl17Alliance
Showing 1 to 10 of 10 entries

Functional Complementation

Information about cross-species functional complementation between yeast and other species, curated by SGD and the Princeton Protein Orthology Database (P-POD).

0 entries for 0 complements


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SpeciesGene IDStrain backgroundDirectionDetailsSourceReference
No complement data for RPL17B
Showing 0 to 0 of 0 entries

Fungal Homologs

Fungal Homology calls are sourced from AllianceMine, which compiles fungal homology calls from FungiDB, CGD, Panther, PomBase, TreeFam, HomoloGene, and SGD.


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Species Gene ID Gene name Description Source

External Identifiers

List of external identifiers for the protein from various database sources.

16 entries for 8 sources


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External IDSource
orf19.4490CGD
Z49452GenBank/EMBL/DDBJ
6322284GenBank/EMBL/DDBJ
1173063GenBank/EMBL/DDBJ
1008376GenBank/EMBL/DDBJ
CAA89472.1GenBank/EMBL/DDBJ
3836LoQAtE
NM_001181610.1NCBI
DAA08628.1NCBI
853262NCBI
Showing 1 to 10 of 16 entries

Resources