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SOK2 / YMR016C Sequence

Sequences and genome annotation information for Reference Strain S288C and a select set of Alternative References.

Feature Type
ORF , Verified
Paralog
PHD1 4
Summary
SOK2/YMR016C is located on the right arm of chromosome XIII between ERG5 C-22 sterol desaturase and SPO20 meiosis-specific subunit of the t-SNARE complex; coding sequence is 2358 nucleotides long with 25 SNPs, 8 of which cause amino acid polymorphisms, and a 24-nucleotide deletion in strain Sigma1278b; SOK2 has paralog PHD1 from the whole genome duplication

Resources

AlphaFold Protein Structure | Gene/Sequence Resources | JBrowse | UniProtKB

S288C only

BLASTN | BLASTP | Design Primers | Restriction Fragment Map | Restriction Fragment Sizes | Six-Frame Translation

S288C vs. other species

BLASTN vs. fungi | BLASTP at NCBI | BLASTP vs. fungi

S288C vs. other strains

Strain Alignment | Variant Viewer