HRB1 / YNL004W Homology


Standard Name
HRB1
Systematic Name
YNL004W
SGD ID
SGD:S000004949
Aliases
TOM34
Feature Type
ORF , Verified
Description
Poly(A+) RNA-binding guard protein; key surveillance factor for the selective export of spliced mRNAs from the nucleus to the cytoplasm; preference for intron-containing genes; similar to Npl3p; HRB1 has a paralog, GBP2, that arose from the whole genome duplication 1 2 3 4 5
Name Description
Hypothetical RNA-Binding protein
Paralog
GBP2 3
Comparative Info

Homologs

Homology calls are sourced from the Alliance of Genome Resources. Many aspects of data integration presented at the Alliance require a common set of orthology relationships among genes for the organisms represented, including human. The Alliance provides the results of all methods that have been benchmarked by the Quest for Orthologs Consortium (QfO). The homolog inferences from the different methods have been integrated using the DRSC Integrative Ortholog Prediction Tool (DIOPT), which integrates a number of existing methods including those used by the Alliance: Ensembl Compara, HGNC, Hieranoid, InParanoid, OMA, OrthoFinder, OrthoInspector, PANTHER, PhylomeDB, Roundup, TreeFam, and ZFIN.

12 entries for 12 homologs


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SpeciesGene IDGene nameSource
Caenorhabditis elegansWB:WBGene00021921rbm-39Alliance
Danio rerioZFIN:ZDB-GENE-051120-114myef2Alliance
Danio rerioZFIN:ZDB-GENE-030131-6898hnrnpmAlliance
Drosophila melanogasterFB:FBgn0267790rumpAlliance
Homo sapiensHGNC:17940MYEF2Alliance
Mus musculusMGI:104592Myef2Alliance
Mus musculusMGI:1926465HnrnpmAlliance
Mus musculusMGI:3641855Myef2lAlliance
Rattus norvegicusRGD:620369HnrnpmAlliance
Rattus norvegicusRGD:1306547Myef2Alliance
Showing 1 to 10 of 12 entries

Functional Complementation

Information about cross-species functional complementation between yeast and other species, curated by SGD and the Princeton Protein Orthology Database (P-POD).

0 entries for 0 complements


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SpeciesGene IDStrain backgroundDirectionDetailsSourceReference
No complement data for HRB1
Showing 0 to 0 of 0 entries

Fungal Homologs

Fungal Homology calls are sourced from AllianceMine, which compiles fungal homology calls from FungiDB, CGD, Panther, PomBase, TreeFam, HomoloGene, and SGD.


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Species Gene ID Gene name Description Source

External Identifiers

List of external identifiers for the protein from various database sources.

31 entries for 8 sources


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External IDSource
4959DIP
154199622GenBank/EMBL/DDBJ
U02536GenBank/EMBL/DDBJ
Z71280GenBank/EMBL/DDBJ
DQ881449GenBank/EMBL/DDBJ
EF123128GenBank/EMBL/DDBJ
X77114GenBank/EMBL/DDBJ
ABI95876.1GenBank/EMBL/DDBJ
AAA64803.1GenBank/EMBL/DDBJ
CAA54378.1GenBank/EMBL/DDBJ
Showing 1 to 10 of 31 entries

Resources