Phenotype Help

YOR309C Phenotype

Phenotype annotations for a gene are curated single mutant phenotypes that require an observable (e.g., "cell shape"), a qualifier (e.g., "abnormal"), a mutant type (e.g., null), strain background, and a reference. In addition, annotations are classified as classical genetics or high-throughput (e.g., large scale survey, systematic mutation set). Whenever possible, allele information and additional details are provided.



Annotations

A phenotype is defined as an observable (e.g., apoptosis) and a qualifier (e.g., increased). There may be more than one row with the same phenotype if that phenotype was observed in separate studies or in different conditions, strains, alleles, etc.

45 entries for 21 phenotypes


Increase the total number of rows showing on this page using the pull-down located below the table, or use the page scroll at the table's top right to browse through the table's pages; use the arrows to the right of a column header to sort by that column; filter the table using the "Filter" box at the top of the table; click on the small "i" buttons located within a cell for an annotation to view further details.

PhenotypeExperiment TypeMutant InformationStrain BackgroundChemicalDetailsReference
budding index: decreased
homozygous diploid, large-scale surveynull
Allele: yor309c-Δ
S288CZettel MF, et al. (2003) PMID:12829295
cell cycle progression in G1 phase: increased duration
homozygous diploid, systematic mutation setnull
Allele: yor309c-Δ
S288CDetails: percentage of G1 cells greater than two standard deviations (41.57%) above wild type when assayed by FACS
Hoose SA, et al. (2012) PMID:22438835
cell size: decreased
systematic mutation set

analysis of cell size for mutants in the systematic deletion collection

null
Allele: yor309c-Δ
S288CDetails: mutant is among the smallest 5% of haploid deletion strains
Jorgensen P, et al. (2002) PMID:12089449
chemical compound accumulation: abnormal
systematic mutation setnull
Allele: yor309c-Δ
S288C alpha-amino acidDetails: Significantly altered free amino acid profile (X^2- test p < 0.01), showing 1 simultaneous amino acid change (Z-test, adjusted p < 0.01)
Mülleder M, et al. (2016) PMID:27693354
chemical compound accumulation: decreased
systematic mutation setnull
Allele: yor309c-Δ
S288C hydrogen sulfideMedia: cysteine supplementation, 500 mg/L
Winter G, et al. (2014) PMID:25517415
chemical compound accumulation: increased
homozygous diploidnull
Allele: yor309c-Δ
S288C0.1 mM potassium tellurite, tellurium atomOttosson LG, et al. (2010) PMID:20675578
chemical compound accumulation: increased
systematic mutation setnull
Allele: yor309c-Δ
S288C alanineMülleder M, et al. (2016) PMID:27693354
chronological lifespan: decreased
systematic mutation set null
Allele: yor309c-Δ
S288CCampos SE, et al. (2018) PMID:29575540
competitive fitness: decreased
competitive growth

fitness profiling using complete deletion alleles

null
Allele: yor309c-Δ
S288CMedia: minimal medium
Details: Relative fitness score: 0.8
Breslow DK, et al. (2008) PMID:18622397
competitive fitness: decreased
systematic mutation setnull
Allele: yor309c-Δ
S288C ethanolQian W, et al. (2012) PMID:23103169
Showing 1 to 10 of 45 entries

Shared Phenotypes

This diagram displays phenotype observables (purple squares) that are shared between the given gene (yellow circle) and other genes (gray circles) based on the number of phenotype observables shared (adjustable using the slider at the bottom).


Reset

Click on a gene or phenotype observable name to go to its specific page within SGD; drag any of the gene or observable objects around within the visualization for easier viewing; click “Reset” to automatically redraw the diagram; filter the genes that share observable terms with the given gene by the number of terms they share by clicking anywhere on the slider bar or dragging the tab to the desired filter number.


Resources