Literature Help
YNCE0018W Literature
All manually curated literature for the specified gene, organized by relevance to the gene and by
association with specific annotations to the gene in SGD. SGD gathers references via a PubMed search for
papers whose titles or abstracts contain “yeast” or “cerevisiae;” these papers are reviewed manually and
linked to relevant genes and literature topics by SGD curators.
- Unique References
- 40
- Aliases
-
tE(UUC)E2
,
tRNA-Glu
Primary Literature
Literature that either focuses on the gene or contains information about function, biological role,
cellular location, phenotype, regulation, structure, or disease homologs in other species for the gene
or gene product.
No primary literature curated.
Download References (.nbib)
- Kumar Y and Bhargava P (2013) A unique nucleosome arrangement, maintained actively by chromatin remodelers facilitates transcription of yeast tRNA genes. BMC Genomics 14:402 PMID:23767421
- Chen C, et al. (2011) Elongator complex influences telomeric gene silencing and DNA damage response by its role in wobble uridine tRNA modification. PLoS Genet 7(9):e1002258 PMID:21912530
- Chan PP and Lowe TM (2009) GtRNAdb: a database of transfer RNA genes detected in genomic sequence. Nucleic Acids Res 37(Database issue):D93-7 PMID:18984615
- Björk GR, et al. (2007) A conserved modified wobble nucleoside (mcm5s2U) in lysyl-tRNA is required for viability in yeast. RNA 13(8):1245-55 PMID:17592039
- Hani J and Feldmann H (1998) tRNA genes and retroelements in the yeast genome. Nucleic Acids Res 26(3):689-96 PMID:9443958
- Lowe TM and Eddy SR (1997) tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence. Nucleic Acids Res 25(5):955-64 PMID:9023104
- Percudani R, et al. (1997) Transfer RNA gene redundancy and translational selection in Saccharomyces cerevisiae. J Mol Biol 268(2):322-30 PMID:9159473
Related Literature
Genes that share literature (indicated by the purple circles) with the specified gene (indicated by yellow circle).
Reset
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Additional Literature
Papers that show experimental evidence for the gene or describe homologs in other species, but
for which the gene is not the paper’s principal focus.
No additional literature curated.
Download References (.nbib)
- Bozaquel-Morais BL, et al. (2018) Protein Phosphatase Sit4 Affects Lipid Droplet Synthesis and Soraphen A Resistance Independent of Its Role in Regulating Elongator Dependent tRNA Modification. Biomolecules 8(3) PMID:29997346
- Joshi K, et al. (2018) Codon-specific effects of tRNA anticodon loop modifications on translational misreading errors in the yeast Saccharomyces cerevisiae. Nucleic Acids Res 46(19):10331-10339 PMID:30060218
- Iben JR and Maraia RJ (2012) tRNAomics: tRNA gene copy number variation and codon use provide bioinformatic evidence of a new anticodon:codon wobble pair in a eukaryote. RNA 18(7):1358-72 PMID:22586155
- Jain R, et al. (2011) Substrate specificity and mutational analysis of Kluyveromyces lactis gamma-toxin, a eukaryal tRNA anticodon nuclease. RNA 17(7):1336-43 PMID:21610213
- Yukawa Y, et al. (2011) A common sequence motif involved in selection of transcription start sites of Arabidopsis and budding yeast tRNA genes. Genomics 97(3):166-72 PMID:21147216
- Ouameur AA, et al. (2010) Probing tRNA interaction with biogenic polyamines. RNA 16(10):1968-79 PMID:20729276
- Noma A, et al. (2009) Mechanistic characterization of the sulfur-relay system for eukaryotic 2-thiouridine biogenesis at tRNA wobble positions. Nucleic Acids Res 37(4):1335-52 PMID:19151091
- Wang X, et al. (2009) Mutation in MTO1 involved in tRNA modification impairs mitochondrial RNA metabolism in the yeast Saccharomyces cerevisiae. Mitochondrion 9(3):180-5 PMID:19460296
- Zaborske JM, et al. (2009) Genome-wide analysis of tRNA charging and activation of the eIF2 kinase Gcn2p. J Biol Chem 284(37):25254-67 PMID:19546227
- Huang B, et al. (2008) A genome-wide screen identifies genes required for formation of the wobble nucleoside 5-methoxycarbonylmethyl-2-thiouridine in Saccharomyces cerevisiae. RNA 14(10):2183-94 PMID:18755837
- Nakai Y, et al. (2008) Thio-modification of yeast cytosolic tRNA requires a ubiquitin-related system that resembles bacterial sulfur transfer systems. J Biol Chem 283(41):27469-27476 PMID:18664566
- Thompson DM, et al. (2008) tRNA cleavage is a conserved response to oxidative stress in eukaryotes. RNA 14(10):2095-103 PMID:18719243
- Cieśla M, et al. (2007) Maf1 is involved in coupling carbon metabolism to RNA polymerase III transcription. Mol Cell Biol 27(21):7693-702 PMID:17785443
- Jakó E, et al. (2007) In silico detection of tRNA sequence features characteristic to aminoacyl-tRNA synthetase class membership. Nucleic Acids Res 35(16):5593-609 PMID:17704131
- Wang X, et al. (2007) Deletion of the MTO2 gene related to tRNA modification causes a failure in mitochondrial RNA metabolism in the yeast Saccharomyces cerevisiae. FEBS Lett 581(22):4228-34 PMID:17706197
- Goodenbour JM and Pan T (2006) Diversity of tRNA genes in eukaryotes. Nucleic Acids Res 34(21):6137-46 PMID:17088292
- Marck C, et al. (2006) The RNA polymerase III-dependent family of genes in hemiascomycetes: comparative RNomics, decoding strategies, transcription and evolutionary implications. Nucleic Acids Res 34(6):1816-35 PMID:16600899
- Lu J, et al. (2005) The Kluyveromyces lactis gamma-toxin targets tRNA anticodons. RNA 11(11):1648-54 PMID:16244131
- Giuliodori S, et al. (2003) A composite upstream sequence motif potentiates tRNA gene transcription in yeast. J Mol Biol 333(1):1-20 PMID:14516739
- Ryckelynck M, et al. (2003) Yeast tRNA(Asp) charging accuracy is threatened by the N-terminal extension of aspartyl-tRNA synthetase. J Biol Chem 278(11):9683-90 PMID:12486031
- Thompson M, et al. (2003) Nucleolar clustering of dispersed tRNA genes. Science 302(5649):1399-401 PMID:14631041
- Wrzesinski J, et al. (1995) Specific RNA cleavages induced by manganese ions. FEBS Lett 374(1):62-8 PMID:7589514
- Hauber J, et al. (1988) Analysis of yeast chromosomal regions carrying members of the glutamate tRNA gene family: various transposable elements are associated with them. Nucleic Acids Res 16(22):10623-34 PMID:2849751
- Wong TW, et al. (1979) The nucleotide sequence of the major glutamate transfer RNA from Schizosaccharomyces pombe. Nucleic Acids Res 6(6):2057-68 PMID:379816
Reviews
No reviews curated.
Gene Ontology Literature
Paper(s) associated with one or more GO (Gene Ontology) terms in SGD for the specified gene.
No gene ontology literature curated.
Interaction Literature
Paper(s) associated with evidence supporting a physical or genetic interaction between the
specified gene and another gene in SGD. Currently, all interaction evidence is obtained from
BioGRID.
No interaction literature curated.
Download References (.nbib)
- Klassen R, et al. (2015) Loss of anticodon wobble uridine modifications affects tRNA(Lys) function and protein levels in Saccharomyces cerevisiae. PLoS One 10(3):e0119261 PMID:25747122
- Chen C, et al. (2011) Elongator complex influences telomeric gene silencing and DNA damage response by its role in wobble uridine tRNA modification. PLoS Genet 7(9):e1002258 PMID:21912530