Literature Help
SNR81 / YNCO0006W Literature
All manually curated literature for the specified gene, organized by relevance to the gene and by
association with specific annotations to the gene in SGD. SGD gathers references via a PubMed search for
papers whose titles or abstracts contain “yeast” or “cerevisiae;” these papers are reviewed manually and
linked to relevant genes and literature topics by SGD curators.
- Unique References
- 32
- Aliases
-
snR81
Primary Literature
Literature that either focuses on the gene or contains information about function, biological role,
cellular location, phenotype, regulation, structure, or disease homologs in other species for the gene
or gene product.
No primary literature curated.
Download References (.nbib)
- Grzechnik P, et al. (2018) Nuclear fate of yeast snoRNA is determined by co-transcriptional Rnt1 cleavage. Nat Commun 9(1):1783 PMID:29725044
- Wu G, et al. (2016) Pseudouridines in U2 snRNA stimulate the ATPase activity of Prp5 during spliceosome assembly. EMBO J 35(6):654-67 PMID:26873591
- Wu G, et al. (2011) U2 snRNA is inducibly pseudouridylated at novel sites by Pus7p and snR81 RNP. EMBO J 30(1):79-89 PMID:21131909
- Piekna-Przybylska D, et al. (2007) New bioinformatic tools for analysis of nucleotide modifications in eukaryotic rRNA. RNA 13(3):305-12 PMID:17283215
- Ma X, et al. (2005) Pseudouridylation of yeast U2 snRNA is catalyzed by either an RNA-guided or RNA-independent mechanism. EMBO J 24(13):2403-13 PMID:15962000
- Schattner P, et al. (2004) Genome-wide searching for pseudouridylation guide snoRNAs: analysis of the Saccharomyces cerevisiae genome. Nucleic Acids Res 32(14):4281-96 PMID:15306656
- Samarsky DA and Fournier MJ (1999) A comprehensive database for the small nucleolar RNAs from Saccharomyces cerevisiae. Nucleic Acids Res 27(1):161-4 PMID:9847166
Related Literature
Genes that share literature (indicated by the purple circles) with the specified gene (indicated by yellow circle).
Reset
Click on a gene or a paper to go to its specific page within SGD. Drag any of the gene or paper objects around
within the visualization for easier viewing and click “Reset” to automatically redraw the diagram.
Additional Literature
Papers that show experimental evidence for the gene or describe homologs in other species, but
for which the gene is not the paper’s principal focus.
No additional literature curated.
Download References (.nbib)
- Trucks S, et al. (2021) Eukaryote specific RNA and protein features facilitate assembly and catalysis of H/ACA snoRNPs. Nucleic Acids Res 49(8):4629-4642 PMID:33823543
- Roy K, et al. (2016) Common genomic elements promote transcriptional and DNA replication roadblocks. Genome Res 26(10):1363-1375 PMID:27540088
- Wu G, et al. (2016) The TOR signaling pathway regulates starvation-induced pseudouridylation of yeast U2 snRNA. RNA 22(8):1146-52 PMID:27268497
- Deryusheva S and Gall JG (2013) Novel small Cajal-body-specific RNAs identified in Drosophila: probing guide RNA function. RNA 19(12):1802-14 PMID:24149844
- Cruz JA and Westhof E (2011) Identification and annotation of noncoding RNAs in Saccharomycotina. C R Biol 334(8-9):671-8 PMID:21819949
- Karijolich J and Yu YT (2011) Converting nonsense codons into sense codons by targeted pseudouridylation. Nature 474(7351):395-8 PMID:21677757
- van Nues RW, et al. (2011) Box C/D snoRNP catalysed methylation is aided by additional pre-rRNA base-pairing. EMBO J 30(12):2420-30 PMID:21556049
- Preti M, et al. (2010) The telomere-binding protein Tbf1 demarcates snoRNA gene promoters in Saccharomyces cerevisiae. Mol Cell 38(4):614-20 PMID:20513435
- Piekna-Przybylska D, et al. (2008) Ribosome performance is enhanced by a rich cluster of pseudouridines in the A-site finger region of the large subunit. J Biol Chem 283(38):26026-36 PMID:18611858
- Dai Q, et al. (2007) Identification of recognition residues for ligation-based detection and quantitation of pseudouridine and N6-methyladenosine. Nucleic Acids Res 35(18):6322-9 PMID:17881375
- Torchet C, et al. (2005) The complete set of H/ACA snoRNAs that guide rRNA pseudouridylations in Saccharomyces cerevisiae. RNA 11(6):928-38 PMID:15923376
- Edvardsson S, et al. (2003) A search for H/ACA snoRNAs in yeast using MFE secondary structure prediction. Bioinformatics 19(7):865-73 PMID:12724297
Reviews
No reviews curated.
Gene Ontology Literature
Paper(s) associated with one or more GO (Gene Ontology) terms in SGD for the specified gene.
No gene ontology literature curated.
Download References (.nbib)
- Costa AR, et al. (2019) Proteasome inhibition prevents cell death induced by the chemotherapeutic agent cisplatin downstream of DNA damage. DNA Repair (Amst) 73:28-33 PMID:30502926
- Ma X, et al. (2005) Pseudouridylation of yeast U2 snRNA is catalyzed by either an RNA-guided or RNA-independent mechanism. EMBO J 24(13):2403-13 PMID:15962000
- Schattner P, et al. (2004) Genome-wide searching for pseudouridylation guide snoRNAs: analysis of the Saccharomyces cerevisiae genome. Nucleic Acids Res 32(14):4281-96 PMID:15306656
Phenotype Literature
Paper(s) associated with one or more pieces of classical phenotype evidence in SGD for the specified gene.
No phenotype literature curated.
Interaction Literature
Paper(s) associated with evidence supporting a physical or genetic interaction between the
specified gene and another gene in SGD. Currently, all interaction evidence is obtained from
BioGRID.
No interaction literature curated.