Reference: Wang T, et al. (2025) Modular Design of a Copper Ion Biosensor Based on the MAPK Signaling Pathway in Saccharomyces cerevisiae. ACS Synth Biol

Reference Help

Abstract


Copper ion poses serious threats to both the environment and human health. To develop a yeast biosensor with reduced background noise and enhanced detection sensitivity, we constructed a quorum-sensing module with amplified positive feedback. This biosensor employs a copper ion-pheromone communication system, which allows haploid a-type yeast (MATa) to express the α-pheromone gene (mfα2) under the control of the copper ion-inducible promoter pCUP1. The α-pheromone activates the mitogen-activated protein kinase (MAPK) signaling pathway, which in turn induces the expression of the green fluorescent protein (GFP) gene via the pheromone-inducible promoter pprm1. To improve the performance of the biosensor, we optimized the prm1 promoter and constructed the Ste5ΔN-CTM chassis. Specifically, the promoter intensity was improved by converting the three nonconsensus Pheromone Response Elements (PRE) in pprm1 into consensus PRE sequences, resulting in the prm1 Pro promoter. The Ste5ΔN-CTM strain continuously activates the MAPK signaling pathway. Next, to offset the loss of sensitivity and dynamic response range caused by endogenous pheromone degradation, we knocked out the pheromone degradation gene bar1 using CRISPR-Cas9 gene editing technology. Additionally, we established a functional model relating the copper ion concentration to the GFP signal output. In conclusion, this study designed a modular copper ion biosensor system by integrating sensing, amplification, and signal-reporting components, laying a foundation for the development of biosensors for other heavy metals.

Reference Type
Journal Article
Authors
Wang T, Ding S, Xu J, Cai G, Zhang Y, Qi Y, Jiang Y, Zhang P, Wang T, Xin F, ... Show all
Primary Lit For
Additional Lit For
Review For

Gene Ontology Annotations


Increase the total number of rows showing on this page using the pull-down located below the table, or use the page scroll at the table's top right to browse through the table's pages; use the arrows to the right of a column header to sort by that column; filter the table using the "Filter" box at the top of the table.

Gene/Complex Qualifier Gene Ontology Term Aspect Annotation Extension Evidence Method Source Assigned On Reference

Phenotype Annotations


Increase the total number of rows showing on this page using the pull-down located below the table, or use the page scroll at the table's top right to browse through the table's pages; use the arrows to the right of a column header to sort by that column; filter the table using the "Filter" box at the top of the table; click on the small "i" buttons located within a cell for an annotation to view further details.

Gene Phenotype Experiment Type Mutant Information Strain Background Chemical Details Reference

Disease Annotations


Increase the total number of rows showing on this page using the pull-down located below the table, or use the page scroll at the table's top right to browse through the table's pages; use the arrows to the right of a column header to sort by that column; filter the table using the "Filter" box at the top of the table.

Gene Disease Ontology Term Qualifier Evidence Method Source Assigned On Reference

Regulation Annotations


Increase the total number of rows displayed on this page using the pull-down located below the table, or use the page scroll at the table's top right to browse through the table's pages; use the arrows to the right of a column header to sort by that column; to filter the table by a specific experiment type, type a keyword into the Filter box (for example, “microarray”); download this table as a .txt file using the Download button or click Analyze to further view and analyze the list of target genes using GO Term Finder, GO Slim Mapper, or SPELL.

Regulator Target Direction Regulation Of Happens During Method Evidence

Post-translational Modifications


Increase the total number of rows showing on this page by using the pull-down located below the table, or use the page scroll at the table's top right to browse through its pages; use the arrows to the right of a column header to sort by that column; filter the table using the "Filter" box at the top of the table.

Site Modification Modifier Reference

Interaction Annotations


Genetic Interactions

Increase the total number of rows showing on this page by using the pull-down located below the table, or use the page scroll at the table's top right to browse through the table's pages; use the arrows to the right of a column header to sort by that column; filter the table using the "Filter" box at the top of the table; click on the small "i" buttons located within a cell for an annotation to view further details about experiment type and any other genes involved in the interaction.

Interactor Interactor Allele Assay Annotation Action Phenotype SGA score P-value Source Reference

Physical Interactions

Increase the total number of rows showing on this page by using the pull-down located below the table, or use the page scroll at the table's top right to browse through the table's pages; use the arrows to the right of a column header to sort by that column; filter the table using the "Filter" box at the top of the table; click on the small "i" buttons located within a cell for an annotation to view further details about experiment type and any other genes involved in the interaction.

Interactor Interactor Assay Annotation Action Modification Source Reference

Functional Complementation Annotations


Increase the total number of rows showing on this page by using the pull-down located below the table, or use the page scroll at the table's top right to browse through its pages; use the arrows to the right of a column header to sort by that column; filter the table using the "Filter" box at the top of the table.

Gene Species Gene ID Strain background Direction Details Source Reference