AboutBlogDownloadExploreHelpGet Data
Sequence Help

ORC1 / YML065W Sequence

Sequences and genome annotation information for Reference Strain S288C and a select set of Alternative References.

Protein Product
origin recognition complex subunit 1
Feature Type
ORF , Verified
Paralog
SIR3 5
Summary
ORC1/YML065W is located on the left arm of chromosome XIII between SMA2 meiosis-specific prospore membrane protein and TEM1 GTPase; coding sequence is 2745 nucleotides long with 21 SNPs, 5 of which cause amino acid polymorphisms, and an in-frame 12-nucleotide insertion in strains Y55 and CEN.PK in a repetitive section of the gene that adds the 4 amino acids EDED after residue 287; ORC1 has a paralog, SIR3, that arose from the whole genome duplication

Resources

AlphaFold Protein Structure | Gene/Sequence Resources | JBrowse | UniProtKB

S288C only

BLASTN | BLASTP | Design Primers | Restriction Fragment Map | Restriction Fragment Sizes | Six-Frame Translation

S288C vs. other species

BLASTN vs. fungi | BLASTP at NCBI | BLASTP vs. fungi

S288C vs. other strains

Strain Alignment | Variant Viewer