Liao H, et al. (2024) Genome-wide identification of resistance genes and response mechanism analysis of key gene knockout strain to catechol in Saccharomyces cerevisiae. Front Microbiol 15:1364425 PMID:38450166
Yuan M, et al. (2024) Delivery of therapeutic RNA by extracellular vesicles derived from Saccharomyces cerevisiae for medicine applications. J Pharm Sci 113(12):3574-3585 PMID:39454948
Babazadeh R, et al. (2023) The yeast guanine nucleotide exchange factor Sec7 is a bottleneck in spatial protein quality control and detoxifies neurological disease proteins. Sci Rep 13(1):14068 PMID:37640758
Josefson R, et al. (2023) The GET pathway is a major bottleneck for maintaining proteostasis in Saccharomyces cerevisiae. Sci Rep 13(1):9285 PMID:37286562
Li Q, et al. (2023) Genome-wide identification of resistance genes and cellular analysis of key gene knockout strain under 5-hydroxymethylfurfural stress in Saccharomyces cerevisiae. BMC Microbiol 23(1):382 PMID:38049732
Saha D, et al. (2023) The AT-hook is an evolutionarily conserved auto-regulatory domain of SWI/SNF required for cell lineage priming. Nat Commun 14(1):4682 PMID:37542049
Wang H, et al. (2023) Discovery of new strains for furfural degradation using adaptive laboratory evolution in Saccharomyces cerevisiae. J Hazard Mater 459:132090 PMID:37480608
Cao X, et al. (2022) Genome-Wide Identification of Cellular Pathways and Key Genes That Respond to Sodium Bicarbonate Stress in Saccharomyces cerevisiae. Front Microbiol 13:831973 PMID:35495664
Chen F, et al. (2022) The Paf1 complex is required for RNA polymerase II removal in response to DNA damage. Proc Natl Acad Sci U S A 119(40):e2207332119 PMID:36161924
Fu W, et al. (2022) Genome-wide identification of resistance genes and transcriptome regulation in yeast to accommodate ammonium toxicity. BMC Genomics 23(1):514 PMID:35840887
Liang P, et al. (2022) Isolation and Culture of Single Microbial Cells by Laser Ejection Sorting Technology. Appl Environ Microbiol 88(3):e0116521 PMID:34818099
Liu B, et al. (2022) Identification and characterization of eight metallothionein genes involved in heavy metal tolerance from the ectomycorrhizal fungus Laccaria bicolor. Environ Sci Pollut Res Int 29(10):14430-14442 PMID:34617232
Xu J, et al. (2022) Yeast-derived nanoparticles remodel the immunosuppressive microenvironment in tumor and tumor-draining lymph nodes to suppress tumor growth. Nat Commun 13(1):110 PMID:35013252
Zou L, et al. (2022) Autophagy and beyond: Unraveling the complexity of UNC-51-like kinase 1 (ULK1) from biological functions to therapeutic implications. Acta Pharm Sin B 12(10):3743-3782 PMID:36213540
Chen F, et al. (2021) Biochemical insights into Paf1 complex-induced stimulation of Rad6/Bre1-mediated H2B monoubiquitination. Proc Natl Acad Sci U S A 118(33) PMID:34385316
Choi WS, et al. (2021) Structure of human BCCIP and implications for binding and modification of partner proteins. Protein Sci 30(3):693-699 PMID:33452718
Eisele F, et al. (2021) An Hsp90 co-chaperone links protein folding and degradation and is part of a conserved protein quality control. Cell Rep 35(13):109328 PMID:34192536
He X, et al. (2021) Effects of Lactobacillus plantarum on the ethanol tolerance of Saccharomyces cerevisiae. Appl Microbiol Biotechnol 105(6):2597-2611 PMID:33646374
Jin X, et al. (2021) A Genome-Wide Screen in Saccharomyces cerevisiae Reveals a Critical Role for Oxidative Phosphorylation in Cellular Tolerance to Lithium Hexafluorophosphate. Cells 10(4) PMID:33924665
Shah AA, et al. (2021) Hydrogen sulfide treatment at the late growth stage of Saccharomyces cerevisiae extends chronological lifespan. Aging (Albany NY) 13(7):9859-9873 PMID:33744847
Kumar A, et al. (2020) Actin R256 Mono-methylation Is a Conserved Post-translational Modification Involved in Transcription. Cell Rep 32(13):108172 PMID:32997990
Wu J, et al. (2020) A novel integrated process to convert cellulose and hemicellulose in rice straw to biobutanol. Environ Res 186:109580 PMID:32668543
Yu B, et al. (2020) GTB-PPI: Predict Protein-protein Interactions Based on L1-regularized Logistic Regression and Gradient Tree Boosting. Genomics Proteomics Bioinformatics 18(5):582-592 PMID:33515750
Zhou H, et al. (2020) Snf5 and Swi3 subcomplex formation is required for SWI/SNF complex function in yeast. Biochem Biophys Res Commun 526(4):934-940 PMID:32284172
Babazadeh R, et al. (2019) Syntaxin 5 Is Required for the Formation and Clearance of Protein Inclusions during Proteostatic Stress. Cell Rep 28(8):2096-2110.e8 PMID:31433985
Huang ZR, et al. (2019) Microbial communities and volatile metabolites in different traditional fermentation starters used for Hong Qu glutinous rice wine. Food Res Int 121:593-603 PMID:31108786
Li X, et al. (2019) Mck1 defines a key S-phase checkpoint effector in response to various degrees of replication threats. PLoS Genet 15(8):e1008136 PMID:31381575
Liu B, et al. (2019) Stearoyl-ACP Δ9 Desaturase 6 and 8 (GhA-SAD6 and GhD-SAD8) Are Responsible for Biosynthesis of Palmitoleic Acid Specifically in Developing Endosperm of Upland Cotton Seeds. Front Plant Sci 10:703 PMID:31214221
Liu X, et al. (2019) Novel tool to quantify cell wall porosity relates wall structure to cell growth and drug uptake. J Cell Biol 218(4):1408-1421 PMID:30782779
Lyu Z, et al. (2019) mTORC1-Sch9 regulates hydrogen sulfide production through the transsulfuration pathway. Aging (Albany NY) 11(19):8418-8432 PMID:31582588
Sun PP, et al. (2019) DeepMRMP: A new predictor for multiple types of RNA modification sites using deep learning. Math Biosci Eng 16(6):6231-6241 PMID:31698559
Ban Z, et al. (2018) Noncatalytic chalcone isomerase-fold proteins in Humulus lupulus are auxiliary components in prenylated flavonoid biosynthesis. Proc Natl Acad Sci U S A 115(22):E5223-E5232 PMID:29760092
Lindström M and Liu B (2018) Yeast as a Model to Unravel Mechanisms Behind FUS Toxicity in Amyotrophic Lateral Sclerosis. Front Mol Neurosci 11:218 PMID:30002616
Ouyang L, et al. (2018) Small-Molecule Activator of UNC-51-Like Kinase 1 (ULK1) That Induces Cytoprotective Autophagy for Parkinson's Disease Treatment. J Med Chem 61(7):2776-2792 PMID:29561612
Zhang F, et al. (2018) A Central Edge Selection Based Overlapping Community Detection Algorithm for the Detection of Overlapping Structures in Protein⁻Protein Interaction Networks. Molecules 23(10) PMID:30322177
Berglund LL, et al. (2017) Differential effects of soluble and aggregating polyQ proteins on cytotoxicity and type-1 myosin-dependent endocytosis in yeast. Sci Rep 7(1):11328 PMID:28900136
Fruhmann G, et al. (2017) Yeast buddies helping to unravel the complexity of neurodegenerative disorders. Mech Ageing Dev 161(Pt B):288-305 PMID:27181083
Ouyang L, et al. (2017) A small-molecule activator induces ULK1-modulating autophagy-associated cell death in triple negative breast cancer. Autophagy 13(4):777-778 PMID:28165887
Zheng J, et al. (2017) Role of the ribosomal quality control machinery in nucleocytoplasmic translocation of polyQ-expanded huntingtin exon-1. Biochem Biophys Res Commun 493(1):708-717 PMID:28864412
Hill SM, et al. (2016) Asymmetric Inheritance of Aggregated Proteins and Age Reset in Yeast Are Regulated by Vac17-Dependent Vacuolar Functions. Cell Rep 16(3):826-38 PMID:27373154
Liu B, et al. (2016) iRSpot-DACC: a computational predictor for recombination hot/cold spots identification based on dinucleotide-based auto-cross covariance. Sci Rep 6:33483 PMID:27641752
Liu B, et al. (2016) iRSpot-DACC: a computational predictor for recombination hot/cold spots identification based on dinucleotide-based auto-cross covariance. Sci Rep 6:33483 PMID:27641752
Liu B, et al. (2016) Kinetic analysis of bypass of O(6)- methylguanine by the catalytic core of yeast DNA polymerase eta. Arch Biochem Biophys 596:99-107 PMID:26976707
Liu B, et al. (2016) Recombination Hotspot/Coldspot Identification Combining Three Different Pseudocomponents via an Ensemble Learning Approach. Biomed Res Int 2016:8527435 PMID:27648451
Xue Q, et al. (2016) Kinetic analysis of bypass of 7,8-dihydro-8-oxo-2'-deoxyguanosine by the catalytic core of yeast DNA polymerase η. Biochimie 121:161-9 PMID:26700143
Zhang B, et al. (2016) C-terminal domain (CTD) phosphatase links Rho GTPase signaling to Pol II CTD phosphorylation in Arabidopsis and yeast. Proc Natl Acad Sci U S A 113(50):E8197-E8206 PMID:27911772
Zhang L, et al. (2016) Unraveling the roles of Atg4 proteases from autophagy modulation to targeted cancer therapy. Cancer Lett 373(1):19-26 PMID:26805760
Zhao L, et al. (2016) A genome-wide imaging-based screening to identify genes involved in synphilin-1 inclusion formation in Saccharomyces cerevisiae. Sci Rep 6:30134 PMID:27440388
Jia J, et al. (2015) iPPI-Esml: An ensemble classifier for identifying the interactions of proteins by incorporating their physicochemical properties and wavelet transforms into PseAAC. J Theor Biol 377:47-56 PMID:25908206
Luo Y, et al. (2015) Effect of Yeast Cell Morphology, Cell Wall Physical Structure and Chemical Composition on Patulin Adsorption. PLoS One 10(8):e0136045 PMID:26295574
Mei F, et al. (2015) LASS2/TMSG1 inhibits growth and invasion of breast cancer cell in vitro through regulation of vacuolar ATPase activity. Tumour Biol 36(4):2831-44 PMID:25501280
Zhu X, et al. (2015) Mediator tail subunits can form amyloid-like aggregates in vivo and affect stress response in yeast. Nucleic Acids Res 43(15):7306-14 PMID:26138482
Liu B, et al. (2014) The effect of intrachain electrostatic repulsion on conformational disorder and dynamics of the Sic1 protein. J Phys Chem B 118(15):4088-97 PMID:24673507
Song J, et al. (2014) Essential genetic interactors of SIR2 required for spatial sequestration and asymmetrical inheritance of protein aggregates. PLoS Genet 10(7):e1004539 PMID:25079602
Xu X, et al. (2014) Silencing of LASS2/TMSG1 enhances invasion and metastasis capacity of prostate cancer cell. J Cell Biochem 115(4):731-43 PMID:24453046
Zhang Y, et al. (2014) The de novo biosynthesis of vitamin B6 is required for disease resistance against Botrytis cinerea in tomato. Mol Plant Microbe Interact 27(7):688-99 PMID:24678833
Zhao W, et al. (2014) Nar1 deficiency results in shortened lifespan and sensitivity to paraquat that is rescued by increased expression of mitochondrial superoxide dismutase. Mech Ageing Dev 138:53-8 PMID:24486555
Li C, et al. (2013) Effect of NaCl on the heavy metal tolerance and bioaccumulation of Zygosaccharomyces rouxii and Saccharomyces cerevisiae. Bioresour Technol 143:46-52 PMID:23774294
Sampath V, et al. (2013) Biochemical characterization of Hpa2 and Hpa3, two small closely related acetyltransferases from Saccharomyces cerevisiae. J Biol Chem 288(30):21506-13 PMID:23775086
Wang J, et al. (2012) Identifying protein complexes from interactome based on essential proteins and local fitness method. IEEE Trans Nanobioscience 11(4):324-35 PMID:22711784
Caballero A, et al. (2011) Absence of mitochondrial translation control proteins extends life span by activating sirtuin-dependent silencing. Mol Cell 42(3):390-400 PMID:21549315
Lai JZ, et al. (2011) [Analysis of components difference of yeast strains based on laser tweezers Raman spectroscopy combined with multistatistical analysis]. Guang Pu Xue Yu Guang Pu Fen Xi 31(2):412-7 PMID:21510393
Mu P, et al. (2011) Cu2+ triggers reversible aggregation of a disordered His-rich dehydrin MpDhn12 from Musa paradisiaca. J Biochem 150(5):491-9 PMID:21737399
Tang X, et al. (2011) A comparison of the functional modules identified from time course and static PPI network data. BMC Bioinformatics 12:339 PMID:21849017
Wang J, et al. (2010) Identifying protein complexes from interaction networks based on clique percolation and distance restriction. BMC Genomics 11 Suppl 2(Suppl 2):S10 PMID:21047377
Liu B, et al. (2009) Trypanosomes have six mitochondrial DNA helicases with one controlling kinetoplast maxicircle replication. Mol Cell 35(4):490-501 PMID:19646907
Liu B, et al. (2009) Disruption of the OCH1 and MNN1 genes decrease N-glycosylation on glycoprotein expressed in Kluyveromyces lactis. J Biotechnol 143(2):95-102 PMID:19559061
Archer CT, et al. (2008) Physical and functional interactions of monoubiquitylated transactivators with the proteasome. J Biol Chem 283(31):21789-98 PMID:18515799
Piekna-Przybylska D, et al. (2007) The U1 snRNA hairpin II as a RNA affinity tag for selecting snoRNP complexes. Methods Enzymol 425:317-53 PMID:17673090
Simpson GR, et al. (2006) Combination of a fusogenic glycoprotein, prodrug activation, and oncolytic herpes simplex virus for enhanced local tumor control. Cancer Res 66(9):4835-42 PMID:16651439
Liu B, et al. (2005) [Expression and identification of F1 antigen of Y.pestis in Saccharomyces cerevisiae]. Xi Bao Yu Fen Zi Mian Yi Xue Za Zhi 21(4):425-7, 431 PMID:15989782
Hess D, et al. (2004) Spt10-dependent transcriptional activation in Saccharomyces cerevisiae requires both the Spt10 acetyltransferase domain and Spt21. Mol Cell Biol 24(1):135-43 PMID:14673149
King TH, et al. (2003) Ribosome structure and activity are altered in cells lacking snoRNPs that form pseudouridines in the peptidyl transferase center. Mol Cell 11(2):425-35 PMID:12620230
Liu B, et al. (2003) Human T-lymphotropic virus type 1 oncoprotein tax promotes unscheduled degradation of Pds1p/securin and Clb2p/cyclin B1 and causes chromosomal instability. Mol Cell Biol 23(15):5269-81 PMID:12861013
Wong HC, et al. (2000) Structural basis of the recognition of the dishevelled DEP domain in the Wnt signaling pathway. Nat Struct Biol 7(12):1178-84 PMID:11101902
Wolberger C, et al. (1991) Crystal structure of a MAT alpha 2 homeodomain-operator complex suggests a general model for homeodomain-DNA interactions. Cell 67(3):517-28 PMID:1682054