Liu Y, et al. (2025) Improving Cellular Protein Content of Saccharomyces cerevisiae Based on Adaptive Evolution and Flow Cytometry-Aided High Throughput Screening. J Agric Food Chem 73(1):706-717 PMID:39723951
Tang D, et al. (2025)TIM8 Deficiency in Yeast Induces Endoplasmic Reticulum Stress and Shortens the Chronological Lifespan. Biomolecules 15(2) PMID:40001574
Cui H, et al. (2024) Effect of ATG8 or SAC1 deficiency on the cell proliferation and lifespan of the long-lived PMT1 deficiency yeast cells. FEMS Microbiol Lett 371 PMID:38258560
Dai M, et al. (2024) The EH domain-containing protein, EdeA, is involved in endocytosis, cell wall integrity, and pathogenicity in Aspergillus fumigatus. mSphere 9(5):e0005724 PMID:38687129
Gygi JS, et al. (2024) Proteome-wide abundance profiling of yeast deletion strains for GET pathway members using sample multiplexing. Proteomics 24(17):e2300303 PMID:37882342
Hou R, et al. (2024) Proteomic analysis reveals that the co-ordination of cytosolic and mitochondrial pathways is beneficial for sabinene biosynthesis in engineered Saccharomyces cerevisiae. Biotechnol J 19(4):e2300710 PMID:38581096
Jiao X, et al. (2024) De novo production of protoberberine and benzophenanthridine alkaloids through metabolic engineering of yeast. Nat Commun 15(1):8759 PMID:39384562
Kang Y, et al. (2024) Metabolic Engineering of Saccharomyces cerevisiae for High-Level Production of l-Pipecolic Acid from Glucose. ACS Synth Biol 13(10):3378-3388 PMID:39267441
Li Y, et al. (2024) Engineering the L-tryptophan metabolism for efficient de novo biosynthesis of tryptophol in Saccharomyces cerevisiae. Biotechnol Biofuels Bioprod 17(1):130 PMID:39415302
Milholland KL, et al. (2024) Cdc14 phosphatases use an intramolecular pseudosubstrate motif to stimulate and regulate catalysis. J Biol Chem 300(9):107644 PMID:39122012
Rossio V, et al. (2024) Proteome Profiling of S. cerevisiae Strains Lacking the Ubiquitin-Conjugating Enzymes Ubc4 and Ubc5 During Exponential Growth and After Heat Shock Treatment. Microorganisms 12(11) PMID:39597624
Sadeghi SA, et al. (2024) Pilot Evaluation of the Long-Term Reproducibility of Capillary Zone Electrophoresis-Tandem Mass Spectrometry for Top-Down Proteomics of a Complex Proteome Sample. J Proteome Res 23(4):1399-1407 PMID:38417052
Sun W, et al. (2024) Effect of sequential fermentation with indigenous non-Saccharomyces cerevisiae combinations and Saccharomyces cerevisiae on the chemical composition and aroma compounds evolution of kiwifruit wine. Food Chem 460(Pt 3):140758 PMID:39121775
Berenson A, et al. (2023) Paired yeast one-hybrid assays to detect DNA-binding cooperativity and antagonism across transcription factors. Nat Commun 14(1):6570 PMID:37853017
He J, et al. (2023) The AAA-ATPase Yta4/ATAD1 interacts with the mitochondrial divisome to inhibit mitochondrial fission. PLoS Biol 21(8):e3002247 PMID:37590302
Li Y, et al. (2023) Plasmid Copy Number Engineering Accelerates Fungal Polyketide Discovery upon Unnatural Polyketide Biosynthesis. ACS Synth Biol 12(8):2226-2235 PMID:37463503
Lin P, et al. (2023) Direct Utilization of Peroxisomal Acetyl-CoA for the Synthesis of Polyketide Compounds in Saccharomyces cerevisiae. ACS Synth Biol 12(6):1599-1607 PMID:37172280
Liu X, et al. (2023) Real-time monitoring of subcellular states with genetically encoded redox biosensor system (RBS) in yeast cell factories. Biosens Bioelectron 222:114988 PMID:36521204
Liu X, et al. (2023) Measurements of the Force-Dependent Detachment Rates of Cytoplasmic Dynein from Microtubules. Methods Mol Biol 2623:221-238 PMID:36602689
Wang M, et al. (2023) Assembly of nitrogenase biosynthetic pathway in Saccharomyces cerevisiae by using polyprotein strategy. Front Microbiol 14:1137355 PMID:36937264
Xiao C, et al. (2023) Overexpression of genes by stress-responsive promoters increases protein secretion in Saccharomyces cerevisiae. World J Microbiol Biotechnol 39(8):203 PMID:37209206
Xue S, et al. (2023) Comprehensive Analysis of Signal Peptides in Saccharomyces cerevisiae Reveals Features for Efficient Secretion. Adv Sci (Weinh) 10(2):e2203433 PMID:36478443
Xue S, et al. (2023) Comprehensive Analysis of Signal Peptides in Saccharomyces Cerevisiae Reveals Features for Efficient Secretion. Adv Sci (Weinh) 10(6):e2300302 PMID:36825761
Yang C, et al. (2023)FoRSR1 Is Important for Conidiation, Fusaric Acid Production, and Pathogenicity in Fusarium oxysporum f. sp. ginseng. Phytopathology 113(7):1244-1253 PMID:36706002
Yang X, et al. (2023) Structural and biochemical insights into the molecular mechanism of TRPT1 for nucleic acid ADP-ribosylation. Nucleic Acids Res 51(14):7649-7665 PMID:37334830
Chen Y, et al. (2022) SNARE Protein DdVam7 of the Nematode-Trapping Fungus Drechslerella dactyloides Regulates Vegetative Growth, Conidiation, and the Predatory Process via Vacuole Assembly. Microbiol Spectr 10(6):e0187222 PMID:36287065
Feng W, et al. (2022) Distinctive phosphorylation pattern during mitotic exit network (MEN) regulation is important for the development and pathogenicity of Magnaporthe oryzae. Stress Biol 2(1):41 PMID:37676543
Ford HC, et al. (2022) Towards a molecular mechanism underlying mitochondrial protein import through the TOM and TIM23 complexes. Elife 11 PMID:35674314
He X, et al. (2022) Enhancement of Intracellular Accumulation of Copper by Biogenesis of Lipid Droplets in Saccharomyces cerevisiae Revealed by Transcriptomic Analysis. J Agric Food Chem 70(23):7170-7179 PMID:35657321
Huang M, et al. (2022) Effect of Hanseniaspora uvarum-Saccharomyces cerevisiae Mixed Fermentation on Aroma Characteristics of Rosa roxburghii Tratt, Blueberry, and Plum Wines. Molecules 27(22) PMID:36432199
Li H, et al. (2022) A Golgi-Located Transmembrane Nine Protein Gene TMN11 Functions in Manganese/Cadmium Homeostasis and Regulates Growth and Seed Development in Rice. Int J Mol Sci 23(24) PMID:36555524
Liu X, et al. (2022) Prokaryotic and eukaryotic promoters identification based on residual network transfer learning. Bioprocess Biosyst Eng 45(5):955-967 PMID:35279747
Liu X, et al. (2022) Profiling Yeast Deletion Strains Using Sample Multiplexing and Network-Based Analyses. J Proteome Res 21(6):1525-1536 PMID:35544774
Liu X, et al. (2022) Identification of Single Yeast Budding Using Impedance Cytometry with a Narrow Electrode Span. Sensors (Basel) 22(20) PMID:36298094
Navarrete-Perea J, et al. (2022) Assessing interference in isobaric tag-based sample multiplexing using an 18-plex interference standard. Proteomics 22(7):e2100317 PMID:34918453
Qian M, et al. (2022) Engineering of a fungal steroid 11α-hydroxylase and construction of recombinant yeast for improved production of 11α-hydroxyprogesterone. J Biotechnol 353:1-8 PMID:35654275
Wei Z, et al. (2022) Overexpression of MET4 Leads to the Upregulation of Stress-Related Genes and Enhanced Sulfite Tolerance in Saccharomyces uvarum. Cells 11(4) PMID:35203287
Dang Y, et al. (2021) The Bicarbonate Transporter (MoAE4) Localized on Both Cytomembrane and Tonoplast Promotes Pathogenesis in Magnaporthe oryzae. J Fungi (Basel) 7(11) PMID:34829242
Liu X, et al. (2021) Identification and characterization of CTP:phosphocholine cytidylyltransferase CpCCT1 in the resurrection plant Craterostigma plantagineum. Plant Sci 302:110698 PMID:33288011
Liu X, et al. (2021) Inactivation effects and mechanisms of plasma-activated water combined with sodium laureth sulfate (SLES) against Saccharomyces cerevisiae. Appl Microbiol Biotechnol 105(7):2855-2865 PMID:33738554
Liu X, et al. (2021) Dual Fluorescent Protein (yEGFP/DsRed-Express-2) Bioassay System for Rapid Screening for Chemical Mutagens Based on RNR3 Regulation in Saccharomyces Cerevisiae. Biomed Environ Sci 34(5):421-424 PMID:34059182
Liu X, et al. (2021) Deletion of the N-Terminal Domain of Yeast Eukaryotic Initiation Factor 4B Reprograms Translation and Reduces Growth in Urea. Front Mol Biosci 8:787781 PMID:35047555
Zhou S, et al. (2021) The COMPASS-like complex modulates fungal development and pathogenesis by regulating H3K4me3-mediated targeted gene expression in Magnaporthe oryzae. Mol Plant Pathol 22(4):422-439 PMID:33559339
Jiang C, et al. (2020) Raising the production of phloretin by alleviation of by-product of chalcone synthase in the engineered yeast. Sci China Life Sci 63(11):1734-1743 PMID:32347474
Li G, et al. (2020) Phosphorus-Doped Iron Nitride Nanoparticles Encapsulated by Nitrogen-Doped Carbon Nanosheets on Iron Foam In Situ Derived from Saccharomycetes Cerevisiae for Electrocatalytic Overall Water Splitting. Small 16(32):e2001980 PMID:32614517
Li P, et al. (2020) Dual Repressive Function by Cip1, a Budding Yeast Analog of p21, in Cell-Cycle START Regulation. Front Microbiol 11:1623 PMID:32733430
Li Z, et al. (2020) Encapsulation of Mannose-6-phosphate Isomerase in Yeast Spores and Its Application in l-Ribose Production. J Agric Food Chem 68(25):6892-6899 PMID:32486647
Wen W, et al. (2020) An efficient Screening System in Yeast to Select a Hyperactive piggyBac Transposase for Mammalian Applications. Int J Mol Sci 21(9) PMID:32357554
Yang Y, et al. (2020) Glycerol transporter 1 (Gt1) and zinc-regulated transporter 1 (Zrt1) function in different modes for zinc homeostasis in Komagataella phaffii (Pichia pastoris). Biotechnol Lett 42(11):2413-2423 PMID:32661657
Zhang S, et al. (2020) Antioxidant and antidiabetic activities of vanadium-binding protein and trifuhalol A. J Food Biochem 44(12):e13540 PMID:33103256
Zhao B, et al. (2020) A Novel Computational Approach for Identifying Essential Proteins From Multiplex Biological Networks. Front Genet 11:343 PMID:32373163
Cheng S, et al. (2019) Orthogonal Engineering of Biosynthetic Pathway for Efficient Production of Limonene in Saccharomyces cerevisiae. ACS Synth Biol 8(5):968-975 PMID:31063692
Gu H, et al. (2019) Physiological mechanism of improved tolerance of Saccharomyces cerevisiae to lignin-derived phenolic acids in lignocellulosic ethanol fermentation by short-term adaptation. Biotechnol Biofuels 12:268 PMID:31755875
Li X, et al. (2019) Mck1 defines a key S-phase checkpoint effector in response to various degrees of replication threats. PLoS Genet 15(8):e1008136 PMID:31381575
Liu X, et al. (2019) Reconstitution and analyses of RNA interactions with eukaryotic translation initiation factors and ribosomal preinitiation complexes. Methods 162-163:42-53 PMID:30926531
Liu X, et al. (2019) Production of l-Ribulose Using an Encapsulated l-Arabinose Isomerase in Yeast Spores. J Agric Food Chem 67(17):4868-4875 PMID:30995033
Liu X, et al. (2019) Novel tool to quantify cell wall porosity relates wall structure to cell growth and drug uptake. J Cell Biol 218(4):1408-1421 PMID:30782779
Liu X, et al. (2019) Combined Assembly and Targeted Integration of Multigene for Nitrogenase Biosynthetic Pathway in Saccharomyces cerevisiae. ACS Synth Biol 8(8):1766-1775 PMID:31117360
Luo Y, et al. (2019) Exogenous Calcium Ions Enhance Patulin Adsorption Capability of Saccharomyces cerevisiae. J Food Prot 82(8):1390-1397 PMID:31335184
Mukai Y, et al. (2019) Proline metabolism regulates replicative lifespan in the yeast Saccharomyces cerevisiae. Microb Cell 6(10):482-490 PMID:31646149
Nguyen Ba AN, et al. (2019) High-resolution lineage tracking reveals travelling wave of adaptation in laboratory yeast. Nature 575(7783):494-499 PMID:31723263
Qu Y, et al. (2019) Cell Cycle Inhibitor Whi5 Records Environmental Information to Coordinate Growth and Division in Yeast. Cell Rep 29(4):987-994.e5 PMID:31644918
Wang C, et al. (2019) Efficient production of glycyrrhetinic acid in metabolically engineered Saccharomyces cerevisiae via an integrated strategy. Microb Cell Fact 18(1):95 PMID:31138208
Xiao W, et al. (2019) Co-expression of cellulase and xylanase genes in Sacchromyces cerevisiae toward enhanced bioethanol production from corn stover. Bioengineered 10(1):513-521 PMID:31661645
Zhang S, et al. (2019) System-Wide Characterization of MoArf GTPase Family Proteins and Adaptor Protein MoGga1 Involved in the Development and Pathogenicity of Magnaporthe oryzae. mBio 10(5) PMID:31615964
Zheng X, et al. (2019) Fhl1p protein, a positive transcription factor in Pichia pastoris, enhances the expression of recombinant proteins. Microb Cell Fact 18(1):207 PMID:31783868
Zheng Y, et al. (2019) A switch element in the autophagy E2 Atg3 mediates allosteric regulation across the lipidation cascade. Nat Commun 10(1):3600 PMID:31399562
Cheng X, et al. (2018) Genome-Wide Identification and Analysis of HAK/KUP/KT Potassium Transporters Gene Family in Wheat (Triticum aestivum L.). Int J Mol Sci 19(12) PMID:30544665
He M, et al. (2018) MoSnt2-dependent deacetylation of histone H3 mediates MoTor-dependent autophagy and plant infection by the rice blast fungus Magnaporthe oryzae. Autophagy 14(9):1543-1561 PMID:29929416
He W, et al. (2018) Sc-ncDNAPred: A Sequence-Based Predictor for Identifying Non-coding DNA in Saccharomyces cerevisiae. Front Microbiol 9:2174 PMID:30258427
Jiao X, et al. (2018) Exchanging the order of carotenogenic genes linked by porcine teschovirus-1 2A peptide enable to optimize carotenoid metabolic pathway in Saccharomyces cerevisiae. RSC Adv 8(61):34967-34972 PMID:35547038
Larochelle M, et al. (2018) Common mechanism of transcription termination at coding and noncoding RNA genes in fission yeast. Nat Commun 9(1):4364 PMID:30341288
Liu X, et al. (2018) Image Reconstruction Under Contact Impedance Effect in Micro Electrical Impedance Tomography Sensors. IEEE Trans Biomed Circuits Syst 12(3):623-631 PMID:29877825
Liu X, et al. (2018) Identifying protein complexes based on node embeddings obtained from protein-protein interaction networks. BMC Bioinformatics 19(1):332 PMID:30241459
Mao J, et al. (2018) A high-throughput method for screening of L-tyrosine high-yield strains by Saccharomyces cerevisiae. J Gen Appl Microbiol 64(4):198-201 PMID:29695662
Peng D, et al. (2018) Increasing branch and seed yield through heterologous expression of the novel rice S-acyl transferase gene OsPAT15 in Brassica napus L. Breed Sci 68(3):326-335 PMID:30100799
Qian B, et al. (2018) MoPpe1 partners with MoSap1 to mediate TOR and cell wall integrity signalling in growth and pathogenicity of the rice blast fungus Magnaporthe oryzae. Environ Microbiol 20(11):3964-3979 PMID:30246284
Xu B, et al. (2018) Reconstruction of the Protein-Protein Interaction Network for Protein Complexes Identification by Walking on the Protein Pair Fingerprints Similarity Network. Front Genet 9:272 PMID:30087694
Yu D, et al. (2018) A novel, easy and rapid method for constructing yeast two-hybrid vectors using In-Fusion technology. Biotechniques 64(5):219-224 PMID:29673256
Zeng F, et al. (2018) Gpn2 and Rba50 Directly Participate in the Assembly of the Rpb3 Subcomplex in the Biogenesis of RNA Polymerase II. Mol Cell Biol 38(13) PMID:29661922
Cai X, et al. (2017) The Atypical Guanylate Kinase MoGuk2 Plays Important Roles in Asexual/Sexual Development, Conidial Septation, and Pathogenicity in the Rice Blast Fungus. Front Microbiol 8:2467 PMID:29321770
Xia H, et al. (2017) Identification and Characterization of BmVta1, a Bombyx mori (Lepidoptera: Bombycidae) Homologue for Vta1 That is Up-Regulated in Development. J Insect Sci 17(3) PMID:28973578
Yurko N, et al. (2017) MPK1/SLT2 Links Multiple Stress Responses with Gene Expression in Budding Yeast by Phosphorylating Tyr1 of the RNAP II CTD. Mol Cell 68(5):913-925.e3 PMID:29220656
Zhang L, et al. (2017) Association of BUD13 polymorphisms with metabolic syndrome in Chinese population: a case-control study. Lipids Health Dis 16(1):127 PMID:28659142
Gilmore JM, et al. (2016) WDR76 Co-Localizes with Heterochromatin Related Proteins and Rapidly Responds to DNA Damage. PLoS One 11(6):e0155492 PMID:27248496
Jia N, et al. (2016) A DNA2 Homolog Is Required for DNA Damage Repair, Cell Cycle Regulation, and Meristem Maintenance in Plants. Plant Physiol 171(1):318-33 PMID:26951435
Klemm BP, et al. (2016) The Diversity of Ribonuclease P: Protein and RNA Catalysts with Analogous Biological Functions. Biomolecules 6(2) PMID:27187488
Lemay JF, et al. (2016) The Nrd1-like protein Seb1 coordinates cotranscriptional 3' end processing and polyadenylation site selection. Genes Dev 30(13):1558-72 PMID:27401558
Liu X, et al. (2016) SPAR: a random forest-based predictor for self-interacting proteins with fine-grained domain information. Amino Acids 48(7):1655-65 PMID:27074717
Liu X, et al. (2016) Carbamoyl Phosphate Synthetase Subunit MoCpa2 Affects Development and Pathogenicity by Modulating Arginine Biosynthesis in Magnaporthe oryzae. Front Microbiol 7:2023 PMID:28066349
Liu X, et al. (2016) The Atg17-Atg31-Atg29 Complex Coordinates with Atg11 to Recruit the Vam7 SNARE and Mediate Autophagosome-Vacuole Fusion. Curr Biol 26(2):150-160 PMID:26774783
Wang Y, et al. (2016) GOLGI TRANSPORT 1B Regulates Protein Export from the Endoplasmic Reticulum in Rice Endosperm Cells. Plant Cell 28(11):2850-2865 PMID:27803308
Zhao H, et al. (2016) Identifying Multi-Dimensional Co-Clusters in Tensors Based on Hyperplane Detection in Singular Vector Spaces. PLoS One 11(9):e0162293 PMID:27598575
Zhu J, et al. (2016) Utp14 Recruits and Activates the RNA Helicase Dhr1 To Undock U3 snoRNA from the Preribosome. Mol Cell Biol 36(6):965-78 PMID:26729466
Chew LH, et al. (2015) Molecular interactions of the Saccharomyces cerevisiae Atg1 complex provide insights into assembly and regulatory mechanisms. Autophagy 11(6):891-905 PMID:25998554
Dong Y, et al. (2015) MoMyb1 is required for asexual development and tissue-specific infection in the rice blast fungus Magnaporthe oryzae. BMC Microbiol 15:37 PMID:25885817
Jia B, et al. (2015) The Effect of Proanthocyanidins on Growth and Alcoholic Fermentation of Wine Yeast under Copper Stress. J Food Sci 80(6):M1319-24 PMID:25943145
Khan IA, et al. (2015) Mitochondrial fission protein MoFis1 mediates conidiation and is required for full virulence of the rice blast fungus Magnaporthe oryzae. Microbiol Res 178:51-8 PMID:26302847
Liu X and Klionsky DJ (2015) TP53INP2/DOR protein chaperones deacetylated nuclear LC3 to the cytoplasm to promote macroautophagy. Autophagy 11(9):1441-2 PMID:26213321
Liu X, et al. (2015) Characterization of Arabidopsis thaliana GCN2 kinase roles in seed germination and plant development. Plant Signal Behav 10(4):e992264 PMID:25912940
Liu X, et al. (2015) Effect of initial ph on growth characteristics and fermentation properties of Saccharomyces cerevisiae. J Food Sci 80(4):M800-8 PMID:25777552
Liu X, et al. (2015) Involvement of threonine deaminase FgIlv1 in isoleucine biosynthesis and full virulence in Fusarium graminearum. Curr Genet 61(1):55-65 PMID:25129826
Sardana R, et al. (2015) The DEAH-box helicase Dhr1 dissociates U3 from the pre-rRNA to promote formation of the central pseudoknot. PLoS Biol 13(2):e1002083 PMID:25710520
Zhang Y, et al. (2015) MoARG1, MoARG5,6 and MoARG7 involved in arginine biosynthesis are essential for growth, conidiogenesis, sexual reproduction, and pathogenicity in Magnaporthe oryzae. Microbiol Res 180:11-22 PMID:26505307
Dai Q, et al. (2014) A least square method based model for identifying protein complexes in protein-protein interaction network. Biomed Res Int 2014:720960 PMID:25405206
Li Y, et al. (2014) Sequence signatures of genes with accompanying antisense transcripts in Saccharomyces cerevisiae. Sci China Life Sci 57(1):52-8 PMID:24369357
Liu JJ, et al. (2014) Visualization of distinct substrate-recruitment pathways in the yeast exosome by EM. Nat Struct Mol Biol 21(1):95-102 PMID:24336220
Yun Y, et al. (2014) Functional characterization of FgERG3 and FgERG5 associated with ergosterol biosynthesis, vegetative differentiation and virulence of Fusarium graminearum. Fungal Genet Biol 68:60-70 PMID:24785759
Zheng S, et al. (2014) Interaction between ribosome assembly factors Krr1 and Faf1 is essential for formation of small ribosomal subunit in yeast. J Biol Chem 289(33):22692-22703 PMID:24990943
Chen G, et al. (2013) Involvement of MoVMA11, a Putative Vacuolar ATPase c' Subunit, in Vacuolar Acidification and Infection-Related Morphogenesis of Magnaporthe oryzae. PLoS One 8(6):e67804 PMID:23826342
Fan J, et al. (2013) Characterization of the sterol 14α-demethylases of Fusarium graminearum identifies a novel genus-specific CYP51 function. New Phytol 198(3):821-835 PMID:23442154
Guo C, et al. (2013) Function of wheat phosphate transporter gene TaPHT2;1 in Pi translocation and plant growth regulation under replete and limited Pi supply conditions. Planta 237(4):1163-78 PMID:23314830
Liu X, et al. (2013) Structural insights into the N-terminal GIY-YIG endonuclease activity of Arabidopsis glutaredoxin AtGRXS16 in chloroplasts. Proc Natl Acad Sci U S A 110(23):9565-70 PMID:23690600
Liu X, et al. (2013) Expression and functional studies of genes involved in transport and metabolism of glycerol in Pachysolen tannophilus. Microb Cell Fact 12:27 PMID:23514356
Liu X, et al. (2013) Involvement of FgERG4 in ergosterol biosynthesis, vegetative differentiation and virulence in Fusarium graminearum. Mol Plant Pathol 14(1):71-83 PMID:22947191
Mao K, et al. (2013) The scaffold protein Atg11 recruits fission machinery to drive selective mitochondria degradation by autophagy. Dev Cell 26(1):9-18 PMID:23810512
Murakami K, et al. (2013) Formation and fate of a complete 31-protein RNA polymerase II transcription preinitiation complex. J Biol Chem 288(9):6325-32 PMID:23303183
Shah BN, et al. (2013) Imp3 unfolds stem structures in pre-rRNA and U3 snoRNA to form a duplex essential for small subunit processing. RNA 19(10):1372-83 PMID:23980203
Wang K, et al. (2013) Proteolytic processing of Atg32 by the mitochondrial i-AAA protease Yme1 regulates mitophagy. Autophagy 9(11):1828-36 PMID:24025448
Zhao P, et al. (2013) MAIGO2 is involved in abscisic acid-mediated response to abiotic stresses and Golgi-to-ER retrograde transport. Physiol Plant 148(2):246-60 PMID:23025793
Liang M, et al. (2012) Bioconversion of D-galactose to D-tagatose: continuous packed bed reaction with an immobilized thermostable L-arabinose isomerase and efficient purification by selective microbial degradation. Appl Microbiol Biotechnol 93(4):1469-74 PMID:22038246
Liu X, et al. (2012) Structural evolution of the membrane-coating module of the nuclear pore complex. Proc Natl Acad Sci U S A 109(41):16498-503 PMID:23019579
Murakami K, et al. (2012) Tfb6, a previously unidentified subunit of the general transcription factor TFIIH, facilitates dissociation of Ssl2 helicase after transcription initiation. Proc Natl Acad Sci U S A 109(13):4816-21 PMID:22411836
Daugeron MC, et al. (2011) Gcn4 misregulation reveals a direct role for the evolutionary conserved EKC/KEOPS in the t6A modification of tRNAs. Nucleic Acids Res 39(14):6148-60 PMID:21459853
Jiang N, et al. (2011) Regulation of copper homeostasis by Cuf1 associates with its subcellular localization in the pathogenic yeast Cryptococcus neoformans H99. FEMS Yeast Res 11(5):440-8 PMID:21489137
Lin W, et al. (2011) Scc2 regulates gene expression by recruiting cohesin to the chromosome as a transcriptional activator during yeast meiosis. Mol Biol Cell 22(12):1985-96 PMID:21508318
Liu X and Wang HW (2011) Single particle electron microscopy reconstruction of the exosome complex using the random conical tilt method. J Vis Exp PMID:21490573
Liu X, et al. (2011) [Improvement of thermal adaptability and fermentation of industrial ethanologenic yeast by genomic DNA mutagenesis-based genetic recombination]. Sheng Wu Gong Cheng Xue Bao 27(7):1049-56 PMID:22016989
Liu X, et al. (2011) Alpha-synuclein functions in the nucleus to protect against hydroxyurea-induced replication stress in yeast. Hum Mol Genet 20(17):3401-14 PMID:21642386
Liu X, et al. (2011) A sterol C-14 reductase encoded by FgERG24B is responsible for the intrinsic resistance of Fusarium graminearum to amine fungicides. Microbiology (Reading) 157(Pt 6):1665-1675 PMID:21436218
Liu X and Rattray M (2010) Including probe-level measurement error in robust mixture clustering of replicated microarray gene expression. Stat Appl Genet Mol Biol 9:Article42 PMID:21194414
Liu X, et al. (2010) Cu,Zn-superoxide dismutase is required for cell wall structure and for tolerance to cell wall-perturbing agents in Saccharomyces cerevisiae. FEBS Lett 584(6):1245-50 PMID:20176017
Zhang C, et al. (2010) Isolation and characterization of a novel glycogen synthase kinase-3 gene, GmGSK, in Glycine max L. that enhances abiotic stress tolerance in Saccharomyces cerevisiae. Biotechnol Lett 32(6):861-6 PMID:20155384
Arita A, et al. (2009) A genome-wide deletion mutant screen identifies pathways affected by nickel sulfate in Saccharomyces cerevisiae. BMC Genomics 10:524 PMID:19917080
Cao H, et al. (2009) [YPK1 overexpression resulted salt stress hypersensitivity in Saccharomyces cerevisiae is dependent on TOR1]. Wei Sheng Wu Xue Bao 49(8):1069-74 PMID:19835169
Duan X, et al. (2009) Structural and functional insights into the roles of the Mms21 subunit of the Smc5/6 complex. Mol Cell 35(5):657-68 PMID:19748359
Liu X, et al. (2009) Bdf1p deletion affects mitochondrial function and causes apoptotic cell death under salt stress. FEMS Yeast Res 9(2):240-6 PMID:19220868
Tian F, et al. (2009) A graph model based study on regulatory impacts of transcription factors of Drosophila melanogaster and comparison across species. Biochem Biophys Res Commun 386(4):559-62 PMID:19538943
Zhou J, et al. (2009) Analysis of the microflora in Tibetan kefir grains using denaturing gradient gel electrophoresis. Food Microbiol 26(8):770-5 PMID:19835760
Zhou X, et al. (2009) A genome-wide screen in Saccharomyces cerevisiae reveals pathways affected by arsenic toxicity. Genomics 94(5):294-307 PMID:19631266
Liu X, et al. (2008) Development of a highthroughput yeast-based assay for detection of metabolically activated genotoxins. Mutat Res 653(1-2):63-9 PMID:18485802
Wan L, et al. (2008) Conservation and implications of eukaryote transcriptional regulatory regions across multiple species. BMC Genomics 9:623 PMID:19099599
Du L, et al. (2007) Tim18, a component of the mitochondrial translocator, mediates yeast cell death induced by arsenic. Biochemistry (Mosc) 72(8):843-7 PMID:17922641
Liu X, et al. (2007) Molecular and functional analysis of hypoxanthine-guanine phosphoribosyltransferase from Arabidopsis thaliana. New Phytol 175(3):448-461 PMID:17635220
Liu X, et al. (2007) Molecular and functional analysis of hypoxanthine-guanine phosphoribosyltransferase from Arabidopsis thaliana. New Phytol 175(3):448-461 PMID:17635220
Liu X, et al. (2007) Genetic and comparative transcriptome analysis of bromodomain factor 1 in the salt stress response of Saccharomyces cerevisiae. Curr Microbiol 54(4):325-30 PMID:17334841
Mo P, et al. (2007) Identification of two phosphatidylinositol/phosphatidylcholine transfer protein genes that are predominately transcribed in the flowers of Arabidopsis thaliana. J Plant Physiol 164(4):478-86 PMID:16697077
Qian W, et al. (2007) Molecular and functional analysis of phosphomannomutase (PMM) from higher plants and genetic evidence for the involvement of PMM in ascorbic acid biosynthesis in Arabidopsis and Nicotiana benthamiana. Plant J 49(3):399-413 PMID:17217471
Kwok SC, et al. (2006) PTX1(ERGIC2)-VP22 fusion protein upregulates interferon-beta in prostate cancer cell line PC-3. DNA Cell Biol 25(9):523-9 PMID:16989575
Liu X, et al. (2006) Whole-genome comparison of Leu3 binding in vitro and in vivo reveals the importance of nucleosome occupancy in target site selection. Genome Res 16(12):1517-28 PMID:17053089
Liu X, et al. (2006) Molecular cloning and characterization of a novel V-ATPase associated protein, DVA9.2, from human dendritic cells. Life Sci 79(19):1828-38 PMID:16904702
Liu X, et al. (2006) Role of a VPS41 homologue in starvation response, intracellular survival and virulence of Cryptococcus neoformans. Mol Microbiol 61(5):1132-46 PMID:16879414
Tang L, et al. (2006) Inferring direct regulatory targets from expression and genome location analyses: a comparison of transcription factor deletion and overexpression. BMC Genomics 7:215 PMID:16923194
Liu X and Clarke ND (2002) Rationalization of gene regulation by a eukaryotic transcription factor: calculation of regulatory region occupancy from predicted binding affinities. J Mol Biol 323(1):1-8 PMID:12368093
Liu X, et al. (2001) BioProspector: discovering conserved DNA motifs in upstream regulatory regions of co-expressed genes. Pac Symp Biocomput 127-38 PMID:11262934
Lin CY, et al. (2000) Peripheral Golgi protein GRASP65 is a target of mitotic polo-like kinase (Plk) and Cdc2. Proc Natl Acad Sci U S A 97(23):12589-94 PMID:11050165
Read PW, et al. (2000) Human RhoA/RhoGDI complex expressed in yeast: GTP exchange is sufficient for translocation of RhoA to liposomes. Protein Sci 9(2):376-86 PMID:10716190
Feinberg BA, et al. (1998) Direct voltammetric observation of redox driven changes in axial coordination and intramolecular rearrangement of the phenylalanine-82-histidine variant of yeast iso-1-cytochrome c. Biochemistry 37(38):13091-101 PMID:9748315
Sun D, et al. (1998) Cloning, expression, and purification of a catalytic fragment of Moloney murine leukemia virus reverse transcriptase: crystallization of nucleic acid complexes. Protein Sci 7(7):1575-82 PMID:9684890
Liu X, et al. (1996) Either of the major H2A genes but not an evolutionarily conserved H2A.F/Z variant of Tetrahymena thermophila can function as the sole H2A gene in the yeast Saccharomyces cerevisiae. Mol Cell Biol 16(6):2878-87 PMID:8649398